RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CD22P20273 847 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 GSTM2P28161 218 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 S100A3P33764 101 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 ACTR3P61158 418 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 RPS13P62277 151 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 PRDX1Q06830 199 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 LRRC74AQ0VAA2 488 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 FLOT2Q14254 428 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 IL11RAQ14626 422 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 PTGR1Q14914 329 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 PLEKHN1Q494U1 663 aaPredicted RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 PRR30Q53SZ7 412 aaPredicted RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 IRGCQ6NXR0 463 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 PAGE2Q7Z2X7 111 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 AMIGO1Q86WK6 493 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 PPP1R3BQ86XI6 285 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 HPS6Q86YV9 775 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 RBM12BQ8IXT5 1001 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 VPS37AQ8NEZ2 397 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 ABHD11Q8NFV4 315 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 VPS33AQ96AX1 596 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 EPB41L1Q9H4G0 881 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 ACTL8Q9H568 366 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 XKR8Q9H6D3 395 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 AKIRIN1Q9H9L7 192 aaPredicted RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 IL1RL2Q9HB29 575 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 MRPS30Q9NP92 439 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 ACTR10Q9NZ32 417 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 FBLN5Q9UBX5 448 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 SNX7Q9UNH6 387 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 AP3M1Q9Y2T2 418 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 CREBBPQ92793 2442 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 USP9YO00507 2555 aaPredicted RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 LILRA5A6NI73 299 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 A6NL46 340 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ISM1B1AKI9 464 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 H7BY64 318 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PRAMEF4O60810 478 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 GMNNO75496 209 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PSMG1O95456 288 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 C9P02748 559 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 SDC1P18827 310 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PI3P19957 117 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 HNRNPH1P31943 449 aaKnown RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 DCTP40126 519 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 SLC7A2P52569 658 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 RPS15P62841 145 aaKnown RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 KIR2DS3Q14952 304 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 KIAA0040Q15053 153 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PGS1Q32NB8 556 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 FAM174BQ3ZCQ3 159 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PIGGQ5H8A4 983 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PRAMEF9Q5VWM5 478 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 AAGABQ6PD74 315 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 MSANTD1Q6ZTZ1 278 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 TMEM26Q6ZUK4 368 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 R3HCC1LQ7Z5L2 792 aaKnown RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 APLFQ8IW19 511 aaPredicted RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 DPP10Q8N608 796 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 C1orf52Q8N6N3 182 aaKnown RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 BVESQ8NE79 360 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 CDC26Q8NHZ8 85 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 TESCQ96BS2 214 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 LRRC58Q96CX6 371 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 APIPQ96GX9 242 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ITCHQ96J02 903 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 LRGUKQ96M69 825 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PRAP1Q96NZ9 151 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 TSSK3Q96PN8 268 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 OR52E6Q96RD3 313 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ING2Q9H160 280 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 RHBGQ9H310 441 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ZNF768Q9H5H4 540 aaKnown RBP9.64□□□□□ -0.87
SS18-221ENST00000582448 RNPEPL1Q9HAU8 725 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 DMRT3Q9NQL9 472 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 POT1Q9NUX5 634 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 TMEM184CQ9NVA4 438 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 ICKQ9UPZ9 632 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 POMPQ9Y244 141 aa9.64□□□□□ -0.87
SS18-221ENST00000582448 PIKFYVEQ9Y2I7 2098 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 MN1Q10571 1320 aaPredicted RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 TNRC6AQ8NDV7 1962 aaKnown RBP9.63□□□□□ -0.87
SS18-221ENST00000582448 TRBC2A0A5B9 178 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 C9JVG2 144 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 H0Y3Z8 333 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 ANKRD28O15084 1053 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 OR1F1O43749 312 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 PCDH7O60245 1069 aa9.63□□□□□ -0.87
SS18-221ENST00000582448 SEMA3DO95025 777 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms