RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DGKQP52824 942 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 PLTPP55058 493 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 PHEXP78562 749 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 GUCY2DQ02846 1103 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 SLMAPQ14BN4 828 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ACAP2Q15057 778 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 RPS6KA2Q15349 733 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 CPSF6Q16630 551 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFFL-209ENST00000581265 ACSF3Q4G176 576 aaPredicted RBP9.71□□□□□ -0.86
RFFL-209ENST00000581265 NHSL2Q5HYW2 709 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 TMEM64Q6YI46 380 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 PACS2Q86VP3 889 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 NUDT13Q86X67 352 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 PM20D2Q8IYS1 436 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ZNF615Q8N8J6 731 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 C17orf47Q8NEP4 570 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 SPPL2AQ8TCT8 520 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 KCTD4Q8WVF5 259 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 UCN3Q969E3 161 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ADIPOR1Q96A54 375 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 LRRC46Q96FV0 321 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ZNF597Q96LX8 424 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 GPR78Q96P69 363 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 GPATCH1Q9BRR8 931 aaKnown RBP9.71□□□□□ -0.86
RFFL-209ENST00000581265 PRDM14Q9GZV8 571 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 IPPKQ9H8X2 491 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 DLL4Q9NR61 685 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 SNX15Q9NRS6 342 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 FETUBQ9UGM5 382 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 RNF11Q9Y3C5 154 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 TNPO3Q9Y5L0 923 aaKnown RBP9.71□□□□□ -0.86
RFFL-209ENST00000581265 NCKAP5O14513 1909 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 ARHGAP21Q5T5U3 1957 aa9.71□□□□□ -0.86
RFFL-209ENST00000581265 A0A087X1B8 175 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 LRRC14BA6NHZ5 514 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 CD8B2A6NJW9 211 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 A6NNC1 897 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 TRAPPC6AO75865 159 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 SEMA3DO95025 777 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 KLHL2O95198 593 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 LRATO95237 230 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 CLDN9O95484 217 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 ACSL3O95573 720 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 IL2RAP01589 272 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GFAPP14136 432 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 NAGAP17050 411 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 S1PR1P21453 382 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 PIK3R1P27986 724 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 CASP3P42574 277 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 PIK3CGP48736 1102 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 TMED10P49755 219 aaKnown RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 NEK2P51955 445 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 FBXW4P57775 412 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 IRF9Q00978 393 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GTF2H2Q13888 395 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 FLYWCH1Q4VC44 716 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 HLA-DQA1Q5Y7H0 255 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 NSUN5P2Q63ZY6 315 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 OR52E8Q6IFG1 317 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GTF2H2CQ6P1K8 395 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 CDC20BQ86Y33 519 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GALNT12Q8IXK2 581 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GOT1L1Q8NHS2 421 aaPredicted RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 FBXO25Q8TCJ0 367 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 MBD6Q96DN6 1003 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 RMND5BQ96G75 393 aaPredicted RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 RILPQ96NA2 401 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GNRHR2Q96P88 292 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 SERPINI1Q99574 410 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 SMR3AQ99954 134 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 OR10A5Q9H207 317 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 GRPEL1Q9HAV7 217 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 TEX10Q9NXF1 929 aaPredicted RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 MTRF1LQ9UGC7 380 aaKnown RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 C15orf41Q9Y2V0 281 aa9.7□□□□□ -0.86
RFFL-209ENST00000581265 UTP11Q9Y3A2 253 aaKnown RBP9.7□□□□□ -0.86
RFFL-209ENST00000581265 A0A1W2PS29 197 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 KDM4EB2RXH2 506 aaPredicted RBP9.69□□□□□ -0.86
RFFL-209ENST00000581265 CDH16O75309 829 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 GBAP04062 536 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 ABCB1P08183 1280 aaPredicted RBP9.69□□□□□ -0.86
RFFL-209ENST00000581265 CT62P0C5K7 136 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 EPXP11678 715 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 BMP7P18075 431 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 XKP51811 444 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 ZNF136P52737 540 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 WNT3P56703 355 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 NRG3P56975 720 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 RPP38P78345 283 aaKnown RBP9.69□□□□□ -0.86
RFFL-209ENST00000581265 TRADDQ15628 312 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 C10orf62Q5T681 223 aaPredicted RBP9.69□□□□□ -0.86
RFFL-209ENST00000581265 MROH9Q5TGP6 573 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 BICRALQ6AI39 1079 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 TIGD3Q6B0B8 471 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 KLC3Q6P597 504 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 GOLGA7Q7Z5G4 137 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 CAMKMTQ7Z624 323 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 CCDC25Q86WR0 208 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms