RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SERTAD2Q14140 314 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 IQCB1Q15051 598 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 CARTPTQ16568 116 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 KCTD19Q17RG1 926 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 TRIM40Q6P9F5 258 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 PEG10Q86TG7 708 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 WDSUB1Q8N9V3 476 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 ZFAND2BQ8WV99 257 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 PROX1Q92786 737 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 NODALQ96S42 347 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 FBXO6Q9NRD1 293 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 FBXL2Q9UKC9 423 aa12.57□□□□□ -0.4
CSNK1D-213ENST00000580446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.57□□□□□ -0.46e-7■■□□□ 12.4
CSNK1D-213ENST00000580446 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 LRP5LA4QPB2 252 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 LRIT2A6NDA9 550 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 WASHC1A8K0Z3 465 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 E7EVH7 732 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 AQP8O94778 261 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 ZFP36P26651 326 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 PTGDSP41222 190 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 DHX9Q08211 1270 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 LGALS3BPQ08380 585 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.43e-6■■□□□ 13.6
CSNK1D-213ENST00000580446 PON3Q15166 354 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 RAB35Q15286 201 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 ASTE1Q2TB18 679 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 OR5M10Q6IEU7 315 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 SCIMPQ6UWF3 145 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 TAGAPQ8N103 731 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 RHBDF1Q96CC6 855 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 NXNL1Q96CM4 212 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 FBXL20Q96IG2 436 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 PKP2Q99959 881 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 KRTAP17-1Q9BYP8 105 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 ACTR8Q9H981 624 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 TMEFF2Q9UIK5 374 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 TFR2Q9UP52 801 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 SPACA6W5XKT8 324 aa12.56□□□□□ -0.4
CSNK1D-213ENST00000580446 SHISA9B4DS77 424 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 LINC01387J3KSC0 135 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 RTCAO00442 366 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 ICOSLGO75144 302 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 SH3BGRLO75368 114 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 GUCA1CO95843 209 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 GYPCP04921 128 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 ETS1P14921 441 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 CCND1P24385 295 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 SSTR4P31391 388 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 NEK2P51955 445 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 SLC37A1P57057 533 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 NR1I3Q14994 352 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 GUSBP1Q15486 140 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 TAB1Q15750 504 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 STX1AQ16623 288 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 OR5M1Q8NGP8 315 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 OR56A3Q8NH54 315 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 FAM216AQ8WUB2 273 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 EEF1AKMT1Q8WVE0 214 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 SERINC2Q96SA4 455 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 AIF1LQ9BQI0 150 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 ZNF747Q9BV97 191 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 COPS7BQ9H9Q2 264 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 PARVBQ9HBI1 364 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 DNAJC11Q9NVH1 559 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 CAPN11Q9UMQ6 739 aa12.55□□□□□ -0.4
CSNK1D-213ENST00000580446 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 AKR1B10O60218 316 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 ENO3P13929 434 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 IL2RGP31785 369 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 NR4A2P43354 598 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 SLC6A8P48029 635 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 PGGT1BP53609 377 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 RPS13P62277 151 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 PCDH1Q08174 1060 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 AGAP6Q5VW22 663 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 C11orf71Q6IPW1 123 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 AAGABQ6PD74 315 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 ZNF793Q6ZN11 406 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 VN1R5Q7Z5H4 357 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 DENND6AQ8IWF6 608 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 OSBPL11Q9BXB4 747 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms