RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OR14A16Q8NHC5 309 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 DAZLQ92904 295 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 TMEM125Q96AQ2 219 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 MCUR1Q96AQ8 359 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 PPWD1Q96BP3 646 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 NEURL3Q96EH8 262 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 FAM120BQ96EK7 910 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 CPPED1Q9BRF8 314 aaPredicted RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 SLC39A3Q9BRY0 314 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 PNO1Q9NRX1 252 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 ZCCHC3Q9NUD5 404 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 DDX18Q9NVP1 670 aaKnown RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 KCND3Q9UK17 655 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 C19orf53Q9UNZ5 99 aaPredicted RBP10.04□□□□□ -0.8
SS18-213ENST00000579640 NEUROG3Q9Y4Z2 214 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 AK5Q9Y6K8 562 aa10.04□□□□□ -0.8
SS18-213ENST00000579640 C17orf105B2RV13 164 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 GSC2O15499 205 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 COQ9O75208 318 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 LIPCP11150 499 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 DLSTP36957 453 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 SLC7A2P52569 658 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 EFNA3P52797 238 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 OR4D2P58180 307 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 MGAT2Q10469 447 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 FADDQ13158 208 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SAMD4BQ5PRF9 694 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 C6orf120Q7Z4R8 191 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ANKRD37Q7Z713 158 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SLC15A3Q8IY34 581 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 NUP43Q8NFH3 380 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 OR7G2Q8NG99 324 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 OR7G1Q8NGA0 311 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 OR52N2Q8NGI0 321 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 KAT2AQ92830 837 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 NKD1Q969G9 470 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 VPS50Q96JG6 964 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 THUMPD3Q9BV44 507 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 EPS8L2Q9H6S3 715 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ADA2Q9NZK5 511 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ZNF639Q9UID6 485 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 TCFL5Q9UL49 500 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 PCDHGA6Q9Y5G7 932 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 CLCA3PQ9Y6N3 262 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 NUP214P35658 2090 aaPredicted RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 LOC102723996A0A087X1L8 192 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 MYOCOSA0A1B0GUC4 107 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 TRABD2BA6NFA1 517 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 UPK1AO00322 258 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 TERTO14746 1132 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 UMODP07911 640 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 GPX2P18283 190 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 PGM1P36871 562 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 MTPNP58546 118 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 MRPS35P82673 323 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 FUT7Q11130 342 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 TP53BP2Q13625 1128 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SSPNQ14714 243 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SFT2D3Q587I9 215 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 FHL5Q5TD97 284 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ZCCHC12Q6PEW1 402 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 FAM111BQ6SJ93 734 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 CPEB2Q7Z5Q1 589 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 IL22RA1Q8N6P7 574 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 MORN4Q8NDC4 146 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 OR5AK3PQ8NH89 298 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 PTPMT1Q8WUK0 201 aaPredicted RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 KIAA1143Q96AT1 154 aaPredicted RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 FBXL20Q96IG2 436 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SLC35G5Q96KT7 338 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 MS4A4EQ96PG1 132 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 CDRT15Q96T59 188 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 THTPAQ9BU02 230 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 EFHD1Q9BUP0 239 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 CADM1Q9BY67 442 aaKnown RBP10.03□□□□□ -0.8
SS18-213ENST00000579640 CMTM6Q9NX76 183 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 KLK13Q9UKR3 277 aa10.03□□□□□ -0.8
SS18-213ENST00000579640 DMXL1Q9Y485 3027 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 PRAMEF2O60811 474 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SOX30O94993 753 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 PSMG1O95456 288 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 CT62P0C5K7 136 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 MMP11P24347 488 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 PTGER1P34995 402 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SOX18P35713 384 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 ID4P47928 161 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 PRIM2P49643 509 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SELPLGQ14242 412 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 ZNF267Q14586 743 aaPredicted RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 TRMT12Q53H54 448 aaKnown RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 RABL3Q5HYI8 236 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 FAAH2Q6GMR7 532 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms