RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 CDC14AQ9UNH5 594 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC12A4Q9UP95 1085 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 FARSAQ9Y285 508 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PTRH2Q9Y3E5 179 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MMACHCQ9Y4U1 282 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PCDHA9Q9Y5H5 950 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 SMG1Q96Q15 3661 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 PHF3Q92576 2039 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 HIVEP3Q5T1R4 2406 aa3.54□□□□□ -1.84
SMARCE1-215ENST00000578995 MED12Q93074 2177 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NCOA6Q14686 2063 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PRRC2CQ9Y520 2896 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 IGHV3-20A0A0C4DH32 117 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ASPDHA6ND91 283 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 URADA6NGE7 173 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MYO1GB0I1T2 1018 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 K7EM74 188 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC28A1O00337 649 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 HDAC3O15379 428 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 B3GALT2O43825 422 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PCDH7O60245 1069 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PRKNO60260 465 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF354AO60765 605 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 B4GALT2O60909 372 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CTNSO60931 367 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 LDB3O75112 727 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ALOX12BO75342 701 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 DNAJB5O75953 348 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 HSPA4LO95757 839 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 DDAH2O95865 285 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C1QCP02747 245 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPIND1P05546 499 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 KLK1P06870 262 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 KLK3P07288 261 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CELA2AP08217 269 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 IL3P08700 152 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CT62P0C5K7 136 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM58BPP0C7Q3 252 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NR2F6P10588 404 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PIM1P11309 404 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NEFHP12036 1026 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 BCKDHAP12694 445 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 AGXTP21549 392 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 IL10P22301 178 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PTPN6P29350 595 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 IL12AP29459 219 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MDH1P40925 334 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MAP3K8P41279 467 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 AVPR1BP47901 424 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 GYS2P54840 703 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 DIO3P55073 304 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 WNT3P56703 355 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 HSD17B7P56937 341 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 TMPRSS3P57727 454 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 TRA2BP62995 288 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 RPL38P63173 70 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PHC1P78364 1004 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 GUCY1A3Q02108 690 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 FOLH1Q04609 750 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 EMX2Q04743 252 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SLAMF1Q13291 335 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP1A4Q13733 1029 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PTGR1Q14914 329 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PDCD2Q16342 344 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SMU1Q2TAY7 513 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 COL28A1Q2UY09 1125 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 AP5B1Q2VPB7 878 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF750Q32MQ0 723 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SPIN4Q56A73 249 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CFAP157Q5JU67 520 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NDUFAF5Q5TEU4 345 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM198Q66K66 360 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 H3F3CQ6NXT2 135 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC48A1Q6P1K1 146 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM47EQ6ZV65 393 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR155Q7Z3F1 870 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CAMKMTQ7Z624 323 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CDH24Q86UP0 819 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR180Q86V85 440 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 APLFQ8IW19 511 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF595Q8IYB9 648 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 TBC1D19Q8N5T2 526 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF321PQ8N8H1 164 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SIMC1Q8NDZ2 872 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SRFBP1Q8NEF9 429 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ACTRT2Q8TDY3 377 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ELP5Q8TE02 316 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ADAMTS18Q8TE60 1221 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C16orf78Q8WTQ4 265 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PTPMT1Q8WUK0 201 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CCT6BQ92526 530 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 N4BP2L2Q92802 583 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 HOXB13Q92826 284 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP6V1E2Q96A05 226 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NACC2Q96BF6 587 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MIEF2Q96C03 454 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C8orf44Q96CB5 159 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms