RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 C6orf141Q5SZD1 244 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 CDC73Q6P1J9 531 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 TMEM107Q6UX40 140 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 GALNT10Q86SR1 603 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 C17orf82Q86X59 251 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 OFCC1Q8IZS5 231 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 OR6C4Q8NGE1 309 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 RAB8BQ92930 207 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 COL26A1Q96A83 441 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 MBOAT4Q96T53 435 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 GRIP2Q9C0E4 1043 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 MTHFD2LQ9H903 347 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 IRAK4Q9NWZ3 460 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 GIN1Q9NXP7 522 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 MGAT4BQ9UQ53 548 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 LYVE1Q9Y5Y7 322 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 COMMD3-BMI1R4GMX3 469 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 BPTFQ12830 3046 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 CROCCQ5TZA2 2017 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 LOC105369274A0A096LPK9 316 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 HYKKA2RU49 373 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TRIM64A6NGJ6 449 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 SLC9B1P1A6NJY1 282 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 FAAHO00519 579 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 DIRAS1O95057 198 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 H1F0P07305 194 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 CELA2BP08218 269 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 GNAO1P09471 354 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ALOX5P09917 674 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ALPPL2P10696 532 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 PVRP15151 417 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 CD247P20963 164 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 NT5EP21589 574 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 GPR3P46089 330 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ALDH3B2P48448 385 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ARRB1P49407 418 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 MAZP56270 477 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 TEKQ02763 1124 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TUBA3CQ13748 450 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 LARS2Q15031 903 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNHIT3Q15649 155 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZSWIM7Q19AV6 140 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZBED5Q49AG3 693 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 IQCCQ4KMZ1 466 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 EIPR1Q53HC9 387 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 DCST1Q5T197 706 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 FRMPD2BQ6IN97 320 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNF773Q6PK81 442 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TMEM179BQ7Z7N9 219 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 PLXDC1Q8IUK5 500 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 PEX5LQ8IYB4 626 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNF595Q8IYB9 648 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 OR4N4Q8N0Y3 316 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 CA13Q8N1Q1 262 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 DNAJC22Q8N4W6 341 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 DEFB119Q8N690 84 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 SMYD1Q8NB12 490 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TOR1AIP2Q8NFQ8 470 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 OR9A2Q8NGT5 310 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNF675Q8TD23 568 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 IPCEF1Q8WWN9 437 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNF566Q969W8 418 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 CNDP2Q96KP4 475 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 C10orf90Q96M02 699 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ZNF578Q96N58 590 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 FCRL4Q96PJ5 515 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 ALPK1Q96QP1 1244 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 OR7D2Q96RA2 312 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TREX2Q9BQ50 279 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 FNDC11Q9BVV2 318 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 AMBRA1Q9C0C7 1298 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 POLR2J2Q9GZM3 115 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 POLR2J3Q9H1A7 115 aaKnown RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 KRCC1Q9NPI7 259 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 POLE3Q9NRF9 147 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 SOHLH2Q9NX45 425 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 TMEFF2Q9UIK5 374 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 CDC14AQ9UNH5 594 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 NAALAD2Q9Y3Q0 740 aa10.46□□□□□ -0.73
SKA2-204ENST00000578519 MAGED1Q9Y5V3 778 aaPredicted RBP10.46□□□□□ -0.73
SKA2-204ENST00000578519 A0A1B0GTW7 788 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 C4orf51C9J302 202 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 ZNF701M0R085 212 aaPredicted RBP10.45□□□□□ -0.74
SKA2-204ENST00000578519 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
SKA2-204ENST00000578519 YKT6O15498 198 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 P2RX6O15547 441 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 NUDT21O43809 227 aaKnown RBP10.45□□□□□ -0.74
SKA2-204ENST00000578519 OR10H2O60403 315 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 PLOD3O60568 738 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 PRAMEF10O60809 474 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 UGT2B17O75795 530 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 PIAS2O75928 621 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 ZBTB11O95625 1053 aaPredicted RBP10.45□□□□□ -0.74
SKA2-204ENST00000578519 ADAP00813 363 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 C1QCP02747 245 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 ATP1B1P05026 303 aa10.45□□□□□ -0.74
SKA2-204ENST00000578519 SLC35E2P0CK97 266 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms