RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	PIGQ	Q9BRB3	760 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPATCH1	Q9BRR8	931 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NTMT1	Q9BV86	223 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C1QTNF3	Q9BXJ4	246 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ITPA	Q9BY32	194 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UGT2B28	Q9BY64	529 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TXLNGY	Q9BZA5	131 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PRDM14	Q9GZV8	571 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACSS3	Q9H6R3	686 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NOL11	Q9H8H0	719 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IPPK	Q9H8X2	491 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GALNT9	Q9HCQ5	603 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RASSF1	Q9NS23	344 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SACM1L	Q9NTJ5	587 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PSD3	Q9NYI0	1048 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CLCF1	Q9UBD9	225 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OPTC	Q9UBM4	332 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KCNN3	Q9UGI6	736 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EMCN	Q9ULC0	261 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RNF112	Q9ULX5	631 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ERVK-11	Q9UQG0	969 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C15orf41	Q9Y2V0	281 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACOT9	Q9Y305	439 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IKBKG	Q9Y6K9	419 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBN3	Q75N90	2809 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MBD3L3	A6NE82	208 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A8MT66	165 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GOLGA6L6	A8MZA4	724 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	BCKDK	O14874	412 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DLX3	O60479	287 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TSPAN2	O60636	221 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WDR1	O75083	606 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TNFSF13	O75888	250 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SEMA3D	O95025	777 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ATE1	O95260	518 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PSMG1	O95456	288 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TGM6	O95932	706 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PDYN	P01213	254 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ATP1B1	P05026	303 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KLK1	P06870	262 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GSTA2	P09210	222 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MYBL2	P10244	700 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NR2F6	P10588	404 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPM	P14384	443 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NID1	P14543	1247 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EPB42	P16452	691 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCSK2	P16519	638 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CNTF	P26441	200 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ABCD3	P28288	659 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CRABP2	P29373	138 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SPR	P35270	261 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZFP36L2	P47974	494 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MAN2A2	P49641	1150 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STAR	P49675	285 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ART1	P52961	327 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARFIP1	P53367	373 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CASP6	P55212	293 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CDH13	P55290	713 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXA1	P55317	472 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CLDN18	P56856	261 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CORO7	P57737	925 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ETF1	P62495	437 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SKP1	P63208	163 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MRPS35	P82673	323 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLGLB1	Q02325	96 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MAP4K2	Q12851	820 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LAPTM5	Q13571	262 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CAPRIN1	Q14444	709 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLMAP	Q14BN4	828 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DAZAP2	Q15038	168 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACAP2	Q15057	778 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GUSBP1	Q15486	140 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CEBPE	Q15744	281 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	AP5B1	Q2VPB7	878 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GGTA1P	Q4G0N0	100 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF628	Q5EBL2	1059 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NSUN5P2	Q63ZY6	315 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TIGD3	Q6B0B8	471 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM211	Q6ICI0	200 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC48A1	Q6P1K1	146 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM81	Q6P7N7	255 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARSK	Q6UWY0	536 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	APOOL	Q6UXV4	268 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SYT10	Q6XYQ8	523 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RGS9BP	Q6ZS82	235 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GK5	Q6ZS86	529 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FRA10AC1	Q70Z53	315 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	COMMD6	Q7Z4G1	85 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	YRDC	Q86U90	279 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC22A16	Q86VW1	577 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TGIF2LY	Q8IUE0	185 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CTAGE3P	Q8IX95	158 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CIART	Q8N365	385 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TBC1D19	Q8N5T2	526 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC15A4	Q8N697	577 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms