RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PXDC1Q5TGL8 231 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 NXNL2Q5VZ03 156 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 ZNF517Q6ZMY9 492 aaPredicted RBP13.07□□□□□ -0.32
RNF43-202ENST00000577625 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
RNF43-202ENST00000577625 ADCK2Q7Z695 626 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 CACTIN-AS1Q8N1I8 211 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
RNF43-202ENST00000577625 LCN9Q8WX39 176 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 SNAPC3Q92966 411 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 POP5Q969H6 163 aaKnown RBP13.07□□□□□ -0.32
RNF43-202ENST00000577625 RNF145Q96MT1 663 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 F2RL3Q96RI0 385 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 UGT2B28Q9BY64 529 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
RNF43-202ENST00000577625 OR6C2Q9NZP2 312 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 PCDHGB6Q9Y5F9 930 aa13.07□□□□□ -0.32
RNF43-202ENST00000577625 TRBV23OR9-2A0A075B6M9 112 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 TRBC2A0A5B9 178 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 C1orf226A1L170 272 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 CREG1O75629 220 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 TNFP01375 233 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 CHRM5P08912 532 aaPredicted RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 THEGLP0DJG4 465 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 RAP2AP10114 183 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 EFNA1P20827 205 aaPredicted RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 PSMB9P28065 219 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 FZD2Q14332 565 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 ZNF767PQ75MW2 155 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 AMIGO1Q86WK6 493 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 ZDHHC13Q8IUH4 622 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 TTLQ8NG68 377 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 OR4E2Q8NGC2 313 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 GOT1L1Q8NHS2 421 aaPredicted RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 GPBAR1Q8TDU6 330 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 PPCDCQ96CD2 204 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 C17orf62Q9BQA9 187 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
RNF43-202ENST00000577625 NUAK2Q9H093 628 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 TPT1P8Q9HAU6 139 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 V9GYQ6 96 aa13.06□□□□□ -0.32
RNF43-202ENST00000577625 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CLEC3AO75596 197 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SLITRK5O94991 958 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 ITGA2P17301 1181 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 PPIBP23284 216 aaKnown RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 RYKP34925 604 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 BSGP35613 385 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 MC1RQ01726 317 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 MVKQ03426 396 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CHRNB3Q05901 458 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ZP2Q05996 745 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 IL18R1Q13478 541 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 RAB43Q86YS6 212 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ADHFE1Q8IWW8 467 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ADGRF3Q8IZF5 1079 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CREB3L4Q8TEY5 395 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SHDQ96IW2 340 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SLC6A18Q96N87 628 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 AMBRA1Q9C0C7 1298 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 KCNN2Q9H2S1 579 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 LHX9Q9NQ69 397 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 DCAF13Q9NV06 445 aaKnown RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 WDR70Q9NW82 654 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ZNF282Q9UDV7 671 aaPredicted RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SPAG17Q6Q759 2223 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 RTCAO00442 366 aaKnown RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 NDUFS4O43181 175 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 OR7A10O76100 309 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CCNDBP1O95273 360 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 C1QCP02747 245 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CELA2BP08218 269 aaPredicted RBP13.05□□□□□ -0.32
RNF43-202ENST00000577625 IL3P08700 152 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 IL1RNP18510 177 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 BCL6P41182 706 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ZNF691Q5VV52 312 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 KIAA1614Q5VZ46 1190 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 CPZQ66K79 652 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ERICH5Q6P6B1 374 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SETD6Q8TBK2 473 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 ZFAND1Q8TCF1 268 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 FBLIM1Q8WUP2 373 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 NCLNQ969V3 563 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 APOL4Q9BPW4 351 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 DPH7Q9BTV6 452 aa13.05□□□□□ -0.32
RNF43-202ENST00000577625 SARGQ9BW04 601 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms