RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SERPINB1P30740 379 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 HSD17B7P56937 341 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 RAB38P57729 211 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TAS2R50P59544 299 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PSME3P61289 254 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 BTG2P78543 158 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 IRF8Q02556 426 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 SLC34A1Q06495 639 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TUBA3CQ13748 450 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 RCN1Q15293 331 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 AP5B1Q2VPB7 878 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 XKR6Q5GH73 641 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PIGGQ5H8A4 983 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 ADNP2Q6IQ32 1131 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TRIM40Q6P9F5 258 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 ABHD17CQ6PCB6 329 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TUBA3EQ6PEY2 450 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PAOXQ6QHF9 649 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 BLOC1S3Q6QNY0 202 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 LAS2Q8IYD9 372 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 DNAJB8Q8NHS0 232 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 SUN3Q8TAQ9 357 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 SELENOMQ8WWX9 145 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 SPDL1Q96EA4 605 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 METTL2AQ96IZ6 378 aaKnown RBP9.88□□□□□ -0.83
LITAF-216ENST00000574848 CLPTM1LQ96KA5 538 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PTCHD1Q96NR3 888 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 SERINC2Q96SA4 455 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 CDRT15Q96T59 188 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 MS4A8Q9BY19 250 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TRIM15Q9C019 465 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 REXO4Q9GZR2 422 aaKnown RBP9.88□□□□□ -0.83
LITAF-216ENST00000574848 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■■□□□ 11.6
LITAF-216ENST00000574848 TRIM45Q9H8W5 580 aaPredicted RBP9.88□□□□□ -0.83
LITAF-216ENST00000574848 LRTM1Q9HBL6 345 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 NECTIN3Q9NQS3 549 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 C1orf109Q9NX04 203 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 ADA2Q9NZK5 511 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PLEKHB1Q9UF11 243 aaPredicted RBP9.88□□□□□ -0.83
LITAF-216ENST00000574848 MAPRE3Q9UPY8 281 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 POMPQ9Y244 141 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 RNF11Q9Y3C5 154 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 TSC22D4Q9Y3Q8 395 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 PTGDR2Q9Y5Y4 395 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
LITAF-216ENST00000574848 NAV2Q8IVL1 2488 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 ASPDHA6ND91 283 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 NPIPB8E9PQR5 432 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 FAM227AF5H4B4 570 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 H0Y3Z8 333 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 TGFBR3LH3BV60 316 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 B3GALT2O43825 422 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 MAN1A2O60476 641 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 SEC22BO75396 215 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 EEDO75530 441 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 PDE5AO76074 875 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 RASAL1O95294 804 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 F10P00742 488 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CRYABP02511 175 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 TRHRP34981 398 aaPredicted RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 HTR6P50406 440 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 POLR2JP52435 117 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 CLNS1AP54105 237 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 RPL38P63173 70 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 BTN3A2P78410 334 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 PHEXP78562 749 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CHIT1Q13231 466 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 RUNX2Q13950 521 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 FLOT2Q14254 428 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CPSF6Q16630 551 aaKnown RBP eCLIP9.87□□□□□ -0.83
LITAF-216ENST00000574848 HIST2H2ACQ16777 129 aaPredicted RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 ZNF766Q5HY98 468 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 FRG2Q64ET8 278 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 HIST2H2AA3Q6FI13 130 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 GRHL2Q6ISB3 625 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 ZFP1Q6P2D0 407 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CYP20A1Q6UW02 462 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 SCIMPQ6UWF3 145 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 Q6ZSR9 355 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 ZNF595Q8IYB9 648 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 APCDD1LQ8NCL9 501 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 OR2T11Q8NH01 316 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 WDR60Q8WVS4 1066 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 UBE2E3Q969T4 207 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CCDC124Q96CT7 223 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 ASB9Q96DX5 294 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 CMTM7Q96FZ5 175 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 C5orf34Q96MH7 638 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 SIGLEC12Q96PQ1 595 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 KCNC2Q96PR1 638 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 FRG2BQ96QU4 278 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 UTP23Q9BRU9 249 aaKnown RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 ROGDIQ9GZN7 287 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 MUC13Q9H3R2 512 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 LYRM4Q9HD34 91 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 NMRK1Q9NWW6 199 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 DAPP1Q9UN19 280 aa9.87□□□□□ -0.83
LITAF-216ENST00000574848 POLR3HQ9Y535 204 aaPredicted RBP9.87□□□□□ -0.83
LITAF-216ENST00000574848 GABRR3A8MPY1 467 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms