RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TAF8Q7Z7C8 310 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 HMGN2P46Q86SG4 172 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 NUP43Q8NFH3 380 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 OR4D11Q8NGI4 311 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 RERGQ96A58 199 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-208ENST00000574755 ELP4Q96EB1 424 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 SERINC2Q96SA4 455 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 ZFYVE21Q9BQ24 234 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 WFDC6Q9BQY6 131 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 TWSG1Q9GZX9 223 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
VPS33B-208ENST00000574755 TDRD6O60522 2096 aaKnown RBP13.23□□□□□ -0.29
VPS33B-208ENST00000574755 C10orf142B7Z368 130 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 NDUFS2O75306 463 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 FADS2O95864 444 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 EIF2S1P05198 315 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 CDK4P11802 303 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 CTSEP14091 401 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 MAP2K4P45985 399 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 LTB4RQ15722 352 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 KLHL17Q6TDP4 642 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 LACC1Q8IV20 430 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 PARP8Q8N3A8 854 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 CAMKVQ8NCB2 501 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 KAT2AQ92830 837 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 THAP11Q96EK4 314 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 TTYH1Q9H313 450 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 HRASLS2Q9NWW9 162 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 IMPAD1Q9NX62 359 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 LOC105369274A0A096LPK9 316 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 LOC102723532A0A0G2JNH3 316 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 M0R3H8 397 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 MBTPS2O43462 519 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 B3GALT2O43825 422 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 MT-ND2P03891 347 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 H1F0P07305 194 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 PVRP15151 417 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 ELAVL4P26378 380 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 CD6P30203 668 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 CSNK2BP67870 215 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 PTGES3Q15185 160 aaKnown RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 DCST1Q5T197 706 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 ZNF770Q6IQ21 691 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-208ENST00000574755 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 OR4N4Q8N0Y3 316 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 SVOPQ8N4V2 548 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 MIPOL1Q8TD10 442 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 KLHL6Q8WZ60 621 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 ABHD8Q96I13 439 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 OR7D2Q96RA2 312 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 BTBD2Q9BX70 525 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 BCL2L10Q9HD36 194 aa13.22□□□□□ -0.29
VPS33B-208ENST00000574755 KIR2DS5A0A0G2JLQ3 304 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 A0A0G2JNG1 304 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 TRIM64BA6NI03 449 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 OR5K4A6NMS3 321 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 KIR2DS3K7RE56 304 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 UGT2B17O75795 530 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 TLX1P31314 330 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 C1orf61Q13536 156 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 FZD2Q14332 565 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 KIR2DS5Q14953 304 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 COMTD1Q86VU5 262 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 ZNF761Q86XN6 746 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 CCDC103Q8IW40 242 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 C10orf90Q96M02 699 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 CSF3RQ99062 836 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 GPN2Q9H9Y4 310 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 WSB2Q9NYS7 404 aaPredicted RBP13.21□□□□□ -0.29
VPS33B-208ENST00000574755 KCMF1Q9P0J7 381 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 DAPP1Q9UN19 280 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 SLC9A8Q9Y2E8 581 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 SCN2AQ99250 2005 aa13.21□□□□□ -0.29
VPS33B-208ENST00000574755 A0A0G2JPF8 293 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 OR10H3O60404 316 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 ZBTB11O95625 1053 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 SMIM10L1P0DMW3 83 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms