RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 NPLOC4Q8TAT6 608 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RFT1Q96AA3 541 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 MYO19Q96H55 970 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 GSX2Q9BZM3 304 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SAP130Q9H0E3 1048 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 TMEM38AQ9H6F2 299 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 MVB12BQ9H7P6 319 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SRRDQ9UH36 339 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 MGAT4BQ9UQ53 548 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 CLCA2Q9UQC9 943 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 PIPSLA2A3N6 862 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 C7orf66A4D0T2 115 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 K7ERQ8 282 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 KHNYNO15037 678 aaKnown RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 ZNF623O75123 536 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 CELP19835 753 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 BMP8BP34820 402 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 GAS1P54826 345 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 C21orf58P58505 322 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 RING1Q06587 406 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 OXR1Q8N573 874 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 FAM26EQ8N5C1 309 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 ASB11Q8WXH4 323 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 ZNF578Q96N58 590 aaPredicted RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 TAS2R7Q9NYW3 318 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 FKBP7Q9Y680 259 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 KCNMB2Q9Y691 235 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 CACNG2Q9Y698 323 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 TRBV5-4A0A0C4DH59 114 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 TRDV1A0A1B0GX56 115 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 GSAPA4D1B5 854 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 GABRPO00591 440 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 NAT2P11245 290 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 PCSK2P16519 638 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMG6-215ENST00000574501 HNF1BP35680 557 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 ELOAQ14241 798 aaKnown RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 ZNF630Q2M218 657 aaPredicted RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 TCTN3Q6NUS6 607 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 OR52H1Q8NGJ2 320 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 OR6M1Q8NGM8 313 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 MED8Q96G25 268 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
SMG6-215ENST00000574501 ANGPT4Q9Y264 503 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.22
SMG6-215ENST00000574501 SERTM1A2A2V5 107 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 HRO43593 1189 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ATG13O75143 517 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 OR56A5P0C7T3 313 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ZNF8P17098 575 aaPredicted RBP13.64□□□□□ -0.23
SMG6-215ENST00000574501 TYMPP19971 482 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 HNMTP50135 292 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ACLYP53396 1101 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 B4GALNT1Q00973 533 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 MPEG1Q2M385 716 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 IER5LQ5T953 404 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CD276Q5ZPR3 534 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 NR2C2APQ86WQ0 139 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 GPR135Q8IZ08 494 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 IL17RCQ8NAC3 791 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 OR10Z1Q8NGY1 313 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 SLC7A13Q8TCU3 470 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 COQ10AQ96MF6 247 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ARHGAP9Q9BRR9 750 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ADAM30Q9UKF2 790 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 TRPM7Q96QT4 1865 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 PLXNA3P51805 1871 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 SH3BP5O60239 455 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CLDN11O75508 207 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 H1F0P07305 194 aaKnown RBP13.64□□□□□ -0.23
SMG6-215ENST00000574501 LIMS3P0CW19 117 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 LIMS4P0CW20 117 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CBSLP0DN79 551 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ARAFP10398 606 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CD52P31358 61 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CBSP35520 551 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 NSG1P42857 185 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 COX10Q12887 443 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 BAMBIQ13145 260 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 LIPJQ5W064 366 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CD200R1LQ6Q8B3 271 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 CAMKMTQ7Z624 323 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 TECPR1Q7Z6L1 1165 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
SMG6-215ENST00000574501 ARIH2OSQ8N7S6 290 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 LSM14AQ8ND56 463 aaKnown RBP13.64□□□□□ -0.23
SMG6-215ENST00000574501 GPR26Q8NDV2 337 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms