RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	MRM1	Q6IN84	353 aa	Known RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	ZNF793	Q6ZN11	406 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	NFAM1	Q8NET5	270 aa	Predicted RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	B3GNT7	Q8NFL0	401 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	RP9	Q8TA86	221 aa	Known RBP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	SUN3	Q8TAQ9	357 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	FAR1	Q8WVX9	515 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	TM4SF18	Q96CE8	201 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	MARK4	Q96L34	752 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
ABR-223	ENST00000573895	ARMCX1	Q9P291	453 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	MAP10	Q9P2G4	905 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	BAIAP2L1	Q9UHR4	511 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	NTNG1	Q9Y2I2	539 aa		13.4	□□□□□ -0.26
ABR-223	ENST00000573895	FAM234B	A2RU67	622 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	RTCA	O00442	366 aa	Known RBP	13.39	□□□□□ -0.27
ABR-223	ENST00000573895	ATP5H	O75947	161 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	IL6	P05231	212 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TACR1	P25103	407 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	UFM1	P61960	85 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
ABR-223	ENST00000573895	C2orf80	Q0P641	193 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	SLC13A2	Q13183	592 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	STX5	Q13190	355 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	HEPACAM	Q14CZ8	416 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	DPY19L1	Q2PZI1	675 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	FHL5	Q5TD97	284 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	PAOX	Q6QHF9	649 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	BLOC1S3	Q6QNY0	202 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	FAM180A	Q6UWF9	173 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	GPR180	Q86V85	440 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	RPS19BP1	Q86WX3	136 aa	Known RBP	13.39	□□□□□ -0.27
ABR-223	ENST00000573895	RIMKLA	Q8IXN7	391 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	BEST3	Q8N1M1	668 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TMEM132C	Q8N3T6	1108 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	NATD1	Q8N6N6	113 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	AMER2	Q8N7J2	671 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	BCORP1	Q8N888	145 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	ST6GALNAC3	Q8NDV1	305 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TMEM52	Q8NDY8	209 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	GRHL3	Q8TE85	626 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TESC	Q96BS2	214 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	NSL1	Q96IY1	281 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TSSK3	Q96PN8	268 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	NPAS2	Q99743	824 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	FAIM2	Q9BWQ8	316 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	SORBS1	Q9BX66	1292 aa	Known RBP	13.39	□□□□□ -0.27
ABR-223	ENST00000573895	EBPL	Q9BY08	206 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	ADAP2	Q9NPF8	381 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	PHF11	Q9UIL8	331 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	DOPEY1	Q5JWR5	2465 aa		13.39	□□□□□ -0.27
ABR-223	ENST00000573895	TMPRSS11D	O60235	418 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TBX19	O60806	448 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	PRAMEF2	O60811	474 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	GBA	P04062	536 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	SNRPB2	P08579	225 aa	Known RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	EDN3	P14138	238 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TLX1	P31314	330 aa	Predicted RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	HPCAL1	P37235	193 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	CLCN2	P51788	898 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	GPR143	P51810	404 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	POLR2J	P52435	117 aa	Known RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	HNRNPF	P52597	415 aa	Known RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	KCNK10	P57789	538 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TUBA3C	Q13748	450 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	CYLC2	Q14093	348 aa	Predicted RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	SERTAD2	Q14140	314 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	PTGR1	Q14914	329 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ELAVL1	Q15717	326 aa	Known RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	FAM71E1	Q6IPT2	247 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TUBA3E	Q6PEY2	450 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	HORMAD2	Q8N7B1	307 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	FAM47B	Q8NA70	645 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	APCDD1L	Q8NCL9	501 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	DNAJB8	Q8NHS0	232 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	VMP1	Q96GC9	406 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ZNF764	Q96H86	408 aa	Predicted RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	EGLN2	Q96KS0	407 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	CSF3R	Q99062	836 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	MAPKAP1	Q9BPZ7	522 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	SLX1A	Q9BQ83	275 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	UTP23	Q9BRU9	249 aa	Known RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	REEP4	Q9H6H4	257 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.38	□□□□□ -0.27
ABR-223	ENST00000573895	EHD3	Q9NZN3	535 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	CCDC167	Q9P0B6	97 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ATP6V1H	Q9UI12	483 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	TAGLN3	Q9UI15	199 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ASB4	Q9Y574	426 aa		13.38	□□□□□ -0.27
ABR-223	ENST00000573895	ANKUB1	A6NFN9	424 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	TGFBR3L	H3BV60	316 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	PROM1	O43490	865 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	HNRNPCL1	O60812	293 aa	Known RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	ESRRA	P11474	423 aa	Predicted RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	COX4I1	P13073	169 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	PPP2R1B	P30154	601 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	TRHR	P34981	398 aa	Predicted RBP	13.37	□□□□□ -0.27

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