RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZBED6CLQ96FA7 236 aaPredicted RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 GPA33Q99795 319 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 BEX2Q9BXY8 128 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SERHL2Q9H4I8 314 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 RNF121Q9H920 327 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 ZSCAN32Q9NX65 697 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SAGE1Q9NXZ1 904 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 POLR1CO15160 346 aaPredicted RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 NR2F1P10589 423 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 GPC1P35052 558 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 CD300LDQ6UXZ3 194 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TRIM48Q8IWZ4 208 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SYT14Q8NB59 555 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TM9SF4Q92544 642 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 RAD51AP1Q96B01 352 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 LRIG1Q96JA1 1093 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 NRTNQ99748 197 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TM9SF2Q99805 663 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 KATNB1Q9BVA0 655 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TDP1Q9NUW8 608 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TOR4AQ9NXH8 423 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 P2RX2Q9UBL9 471 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SEC14L5O43304 696 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 YES1P07947 543 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 KIR2DL3P43628 341 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 METAP1P53582 386 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 C3orf38Q5JPI3 329 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 OLIG3Q7RTU3 272 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 HMGN2P46Q86SG4 172 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 C17orf64Q86WR6 236 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 AP3S1Q92572 193 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ZFYVE19Q96K21 471 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 MS4A8Q9BY19 250 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 DPEP2Q9H4A9 486 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ANKRA2Q9H9E1 313 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 KCNK12Q9HB15 430 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 TRPC4Q9UBN4 977 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 TAC3Q9UHF0 121 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 DENND4CQ5VZ89 1909 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 STK25O00506 426 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 SLC30A4O14863 429 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 PLA2G10O15496 165 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 TBX19O60806 448 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ALPPP05187 535 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 RB1P06400 928 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ACADMP11310 421 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 CDK5Q00535 292 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 CD83Q01151 205 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 NDUFA9Q16795 377 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 FAM83HQ6ZRV2 1179 aaPredicted RBP14.78□□□□□ -0.04
NUP88-207ENST00000573584 KREMEN2Q8NCW0 462 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ATP6V1C2Q8NEY4 427 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 OR52P1PQ8NH57 321 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 ENKURQ8TC29 256 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 HCAR2Q8TDS4 363 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 RNF170Q96K19 258 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 GDF15Q99988 308 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 MED18Q9BUE0 208 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 RHBGQ9H310 441 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 OR51I1Q9H343 314 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 CTPS2Q9NRF8 586 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 FBXW2Q9UKT8 454 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 PRKAB1Q9Y478 270 aa14.78□□□□□ -0.04
NUP88-207ENST00000573584 C17orf113A0A1B0GUU1 675 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 FEZF1A0PJY2 475 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 MYCP01106 439 aaPredicted RBP14.77□□□□□ -0.04
NUP88-207ENST00000573584 SMSP52788 366 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 EFNB1P98172 346 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 HOXC5Q00444 222 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 TEAD2Q15562 447 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.77□□□□□ -0.04
NUP88-207ENST00000573584 ZNF438Q7Z4V0 828 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 KIAA0907Q7Z7F0 614 aaPredicted RBP14.77□□□□□ -0.04
NUP88-207ENST00000573584 PDZD3Q86UT5 571 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 OR2L2Q8NH16 312 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 SLC9A6Q92581 669 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 UCN3Q969E3 161 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 RNFT2Q96EX2 444 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 AIF1LQ9BQI0 150 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 MAN2C1Q9NTJ4 1040 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 COMMD3Q9UBI1 195 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 SLC9A8Q9Y2E8 581 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 COL4A6Q14031 1691 aa14.77□□□□□ -0.04
NUP88-207ENST00000573584 A0A0B4J293 547 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 KELP23276 732 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 FRKP42685 505 aaPredicted RBP14.77□□□□□ -0.05
NUP88-207ENST00000573584 CAV3P56539 151 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 TLE2Q04725 743 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 RAB40BQ12829 278 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 QPRTQ15274 297 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 C1orf94Q6P1W5 598 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 LILRA6Q6PI73 481 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 ZNF730Q6ZMV8 503 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 MEX3DQ86XN8 651 aaKnown RBP14.77□□□□□ -0.05
NUP88-207ENST00000573584 OR6T1Q8NGN1 323 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 NUS1Q96E22 293 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 RNF31Q96EP0 1072 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 OTUB1Q96FW1 271 aaPredicted RBP14.77□□□□□ -0.05
NUP88-207ENST00000573584 QRFPRQ96P65 431 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 CUEDC1Q9NWM3 386 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms