RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ABCA4P78363 2273 aa8.51□□□□□ -1.05
NPLOC4-210ENST00000572824 ATP6AP2A0A1C7CYW4 349 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 URADA6NGE7 173 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CCDC188H7C350 402 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 DIAPH2O60879 1101 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CTNSO60931 367 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ATP6AP2O75787 350 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ZFAND5O76080 213 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SIX3O95343 332 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 TUBB4AP04350 444 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CD3EP07766 207 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 STMN1P16949 149 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 HIST1H1TP22492 207 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 GP5P40197 560 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SSR2P43308 183 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 NEK2P51955 445 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SLC12A2P55011 1212 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 PLTPP55058 493 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 DLX5P56178 289 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 RAB10P61026 200 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 RPS13P62277 151 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SKP1P63208 163 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 PLGLB1Q02325 96 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 IRF8Q02556 426 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 STX4Q12846 297 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 E2F2Q14209 437 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 TESK1Q15569 626 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 DPY19L1Q2PZI1 675 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SULT1C3Q6IMI6 304 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ZNF585AQ6P3V2 769 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 MTFR2Q6P444 385 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 PLXDC2Q6UX71 529 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 HSDL2Q6YN16 418 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ZNF595Q8IYB9 648 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 KRT78Q8N1N4 520 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 HORMAD2Q8N7B1 307 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SIMC1Q8NDZ2 872 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SPATA4Q8NEY3 305 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 OR7G3Q8NG95 312 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 OR5M3Q8NGP4 307 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 HUS1BQ8NHY5 278 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 GABPB2Q8TAK5 448 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CA5BP1Q8WTZ4 195 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 UBTD2Q8WUN7 234 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ANKRD7Q92527 254 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SMC6Q96SB8 1091 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CPNE1Q99829 537 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 ERP44Q9BS26 406 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 NPLQ9BXD5 320 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 CD244Q9BZW8 370 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 PCNX3Q9H6A9 2034 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 NT5DC2Q9H857 520 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 POPDC3Q9HBV1 291 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 SH2D2AQ9NP31 389 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 DMRT3Q9NQL9 472 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 GPRC5BQ9NZH0 403 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 GPR55Q9Y2T6 319 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 MED12LQ86YW9 2145 aa8.5□□□□□ -1.05
NPLOC4-210ENST00000572824 FLNAP21333 2647 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 A0A0G2JNJ9 132 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 KLRC4-KLRK1H3BQV0 150 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 H2AFYO75367 372 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 NME6O75414 186 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 SCELO95171 688 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 IGKV3-11P04433 115 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 CT62P0C5K7 136 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 MYBL2P10244 700 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 IFNGR1P15260 489 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 AGAP20933 346 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 CPN2P22792 545 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 TRPC1P48995 793 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 HERVK_113P63132 956 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 ERVK-8P63133 956 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 IGLV3-21P80748 117 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 FOLH1Q04609 750 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 GXYLT1Q4G148 440 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 DCST1Q5T197 706 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 KHDRBS2Q5VWX1 349 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 FAM180BQ6P0A1 224 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 C3orf62Q6ZUJ4 267 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 FAM47EQ6ZV65 393 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 SEM1Q6ZVN7 128 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 LRRC70Q7Z2Q7 622 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 MYLK4Q86YV6 388 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 LAS2Q8IYD9 372 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 PRR22Q8IZ63 422 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 TEX9Q8N6V9 391 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 NAXEQ8NCW5 288 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 TTLQ8NG68 377 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 OR10G3Q8NGC4 313 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 OR14A16Q8NHC5 309 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 GPR78Q96P69 363 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 KCNC2Q96PR1 638 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 GAL3ST4Q96RP7 486 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 CCDC77Q9BR77 488 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 EFCAB11Q9BUY7 163 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 ERVK-6Q9BXR3 956 aa8.49□□□□□ -1.05
NPLOC4-210ENST00000572824 LIME1Q9H400 295 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms