RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SUPT7LO94864 414 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GPR75O95800 540 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 OTCP00480 354 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GBAP04062 536 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 RPS17P08708 135 aaKnown RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 FAM58BPP0C7Q3 252 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 TSPAN8P19075 237 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 IMPDH1P20839 514 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 HSD17B3P37058 310 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 HK2P52789 917 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 CDH13P55290 713 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 IGLV3-21P80748 117 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 TNFRSF17Q02223 184 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 FOLH1Q04609 750 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 IFT88Q13099 833 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 TRAF3Q13114 568 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 SGO1Q5FBB7 561 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 C10orf62Q5T681 223 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 IL20RBQ6UXL0 311 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 C16orf47Q6ZP98 133 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 RPS27LQ71UM5 84 aaKnown RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 MDGA2Q7Z553 956 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 LCA5Q86VQ0 697 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 NUDT13Q86X67 352 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 SPPL2CQ8IUH8 684 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GPALPP1Q8IXQ4 340 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 CNPY4Q8N129 248 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 CYP4Z2PQ8N1L4 340 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ZNF321PQ8N8H1 164 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 EIF1ADQ8N9N8 165 aaKnown RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 POGLUT1Q8NBL1 392 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 MYRIPQ8NFW9 859 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 TRPC4APQ8TEL6 797 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ZNF721Q8TF20 911 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 SENP5Q96HI0 755 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 ART5Q96L15 291 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GPR137Q96N19 417 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 C1QTNF3Q9BXJ4 246 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ZNF717Q9BY31 904 aaPredicted RBP6.89□□□□□ -1.31
NUP88-205ENST00000572809 TXLNGYQ9BZA5 131 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ELOVL6Q9H5J4 265 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 WDR41Q9HAD4 459 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 HPF1Q9NWY4 346 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 COPS7AQ9UBW8 275 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 FETUBQ9UGM5 382 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 TBK1Q9UHD2 729 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 DCDC2Q9UHG0 476 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 NPIPA1Q9UND3 350 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 ZGRF1Q86YA3 2104 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 HIVEP3Q5T1R4 2406 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SVILO95425 2214 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 A0A1B0GTL3 188 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 GOLGA8RI6L899 631 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PGRMC2O15173 223 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 DLX3O60479 287 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SLC19A2O60779 497 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZG16O60844 167 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PRKRAO75569 313 aaKnown RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 OR6B1O95007 311 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 OR4F21O95013 312 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SEMA3DO95025 777 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PDYNP01213 254 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 KLK1P06870 262 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SLC35E2P0CK97 266 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ALOX15P16050 662 aaPredicted RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF24P17028 368 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 CNR1P21554 472 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 GALNSP34059 522 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SOX3P41225 446 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 CA7P43166 264 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 MEOX1P50221 254 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 CASP6P55212 293 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 HERVK_113P63132 956 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PLIN5Q00G26 463 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF267Q14586 743 aaPredicted RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 MPEG1Q2M385 716 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF750Q32MQ0 723 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 UNC50Q53HI1 259 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PIGGQ5H8A4 983 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF678Q5SXM1 525 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 CCNYL2Q5T2Q4 361 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 LETMD1Q6P1Q0 360 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 MTFR2Q6P444 385 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 OPN5Q6U736 354 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 DGAT2L6Q6ZPD8 337 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PAGE2Q7Z2X7 111 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 CDH24Q86UP0 819 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SIAH3Q8IW03 269 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ST13P4Q8IZP2 240 aaPredicted RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 GHDCQ8N2G8 530 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms