RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF169Q14929 603 aaPredicted RBP14.67□□□□□ -0.06
CHD3-215ENST00000572750 ZNF468Q5VIY5 522 aaPredicted RBP14.67□□□□□ -0.06
CHD3-215ENST00000572750 TUBA3EQ6PEY2 450 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 RNF111Q6ZNA4 994 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 KIRREL3Q8IZU9 778 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 VWA5B2Q8N398 1253 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 OR9A2Q8NGT5 310 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 GAL3ST4Q96RP7 486 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHD3-215ENST00000572750 GIMAP4Q9NUV9 329 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 MAT2BQ9NZL9 334 aa14.67□□□□□ -0.06
CHD3-215ENST00000572750 WWP2O00308 870 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 FCHO1O14526 889 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 OR2J2O76002 312 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 MAPK1P28482 360 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 MLLT10P55197 1068 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 SLC37A1P57057 533 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 MRPS35P82673 323 aaKnown RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 OC90Q02509 493 aaPredicted RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 EXOSC7Q15024 291 aaKnown RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 TLR1Q15399 786 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 PRICKLE4Q2TBC4 344 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 IL23RQ5VWK5 629 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 FAM111BQ6SJ93 734 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 CCDC116Q8IYX3 515 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 ARMC10Q8N2F6 343 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 SIMC1Q8NDZ2 872 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 SUN3Q8TAQ9 357 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 LRRC8CQ8TDW0 803 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 HAS2Q92819 552 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 SIGLEC12Q96PQ1 595 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 BBS4Q96RK4 519 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 UTP23Q9BRU9 249 aaKnown RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 AKTIPQ9H8T0 292 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 MEAF6Q9HAF1 191 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 SLAMF7Q9NQ25 335 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 INTS9Q9NV88 658 aaKnown RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 MYOTQ9UBF9 498 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 WBP11Q9Y2W2 641 aaKnown RBP14.66□□□□□ -0.06
CHD3-215ENST00000572750 PCDHGA10Q9Y5H3 936 aa14.66□□□□□ -0.06
CHD3-215ENST00000572750 TTLL8A6PVC2 850 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 PCSK2P16519 638 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 POU3F2P20265 443 aaPredicted RBP14.65□□□□□ -0.06
CHD3-215ENST00000572750 NTSP30990 170 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 SOX18P35713 384 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 HPCAL1P37235 193 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 CD96P40200 585 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 MGAT2Q10469 447 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 DUSP8Q13202 625 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 EBPQ15125 230 aaKnown RBP14.65□□□□□ -0.06
CHD3-215ENST00000572750 OR1C1Q15619 314 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 CEBPEQ15744 281 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 ZNF385BQ569K4 471 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 ZNF628Q5EBL2 1059 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 MAVSQ7Z434 540 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 OR8K3Q8NH51 312 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 CIDECQ96AQ7 238 aaPredicted RBP14.65□□□□□ -0.06
CHD3-215ENST00000572750 HES7Q9BYE0 225 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 WWTR1Q9GZV5 400 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 REEP4Q9H6H4 257 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 ANKRA2Q9H9E1 313 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 SLCO1B3Q9NPD5 702 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.65□□□□□ -0.06
CHD3-215ENST00000572750 CELSR1Q9NYQ6 3014 aa14.65□□□□□ -0.06
CHD3-215ENST00000572750 EXPH5Q8NEV8 1989 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 TRAV17A0A0B4J275 112 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 SDHDO14521 159 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 SCAMP2O15127 329 aaKnown RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 HDAC3O15379 428 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 ZNF354AO60765 605 aaPredicted RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 NEURL1O76050 574 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 CBX7O95931 251 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 G6PDP11413 515 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 S1PR1P21453 382 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 ASMTP46597 345 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 SSR4P51571 173 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 NCBP2P52298 156 aaKnown RBP eCLIP14.64□□□□□ -0.07
CHD3-215ENST00000572750 FUT7Q11130 342 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 PDE7AQ13946 482 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 SPINK14Q6IE38 97 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 SLC29A4Q7RTT9 530 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 WDR75Q8IWA0 830 aaKnown RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 SAMD14Q8IZD0 417 aaPredicted RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 FAM9CQ8IZT9 166 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 KRTCAP2Q8N6L1 136 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 ZNF615Q8N8J6 731 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 MDS2Q8NDY4 140 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 OR5L2Q8NGL0 311 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 NUBPLQ8TB37 319 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 NUDT8Q8WV74 236 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 KAT2AQ92830 837 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 PPCDCQ96CD2 204 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 RASL10BQ96S79 203 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 OR10A5Q9H207 317 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 KLHL1Q9NR64 748 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 NOP53Q9NZM5 478 aaKnown RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 LRFN1Q9P244 771 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 EIF3LQ9Y262 564 aaKnown RBP14.64□□□□□ -0.07
CHD3-215ENST00000572750 DTX4Q9Y2E6 619 aa14.64□□□□□ -0.07
CHD3-215ENST00000572750 CACNA1DQ01668 2161 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms