RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 WISP3O95389 354 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-206ENST00000572083 GPR75O95800 540 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 CCDC166P0CW27 439 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 PTPN6P29350 595 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 BUD31P41223 144 aaPredicted RBP18.08■□□□□ 0.48
CCDC40-206ENST00000572083 SLC12A2P55011 1212 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 SRYQ05066 204 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 HLA-DQA1Q5Y7H0 255 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 GAS2L3Q86XJ1 694 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 PDPRQ8NCN5 879 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 UBE2E3Q969T4 207 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 SECISBP2Q96T21 854 aaKnown RBP18.08■□□□□ 0.48
CCDC40-206ENST00000572083 RHOJQ9H4E5 214 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 RYDENQ9NUL5 291 aaKnown RBP18.08■□□□□ 0.48
CCDC40-206ENST00000572083 NDRG3Q9UGV2 375 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 TRPS1Q9UHF7 1281 aa18.08■□□□□ 0.48
CCDC40-206ENST00000572083 PTBP2Q9UKA9 531 aaKnown RBP18.08■□□□□ 0.48
CCDC40-206ENST00000572083 A0A1W2PS29 197 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 PHGDHO43175 533 aaKnown RBP18.07■□□□□ 0.48
CCDC40-206ENST00000572083 PIAS1O75925 651 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 RCBTB2O95199 551 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 ACTL6AO96019 429 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 CD1DP15813 335 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 E2F2Q14209 437 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 FRG1Q14331 258 aaKnown RBP18.07■□□□□ 0.48
CCDC40-206ENST00000572083 SETDB1Q15047 1291 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 CDKL4Q5MAI5 379 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 DEPDC1Q5TB30 811 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 TIGD3Q6B0B8 471 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 PRSS57Q6UWY2 283 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 ANGPTL8Q6UXH0 198 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 LRRC70Q7Z2Q7 622 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 ZCCHC7Q8N3Z6 543 aaKnown RBP18.07■□□□□ 0.48
CCDC40-206ENST00000572083 OR1J4Q8NGS1 313 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 UCN3Q969E3 161 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 TP53INP1Q96A56 240 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 RGMAQ96B86 450 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 ZFP3Q96NJ6 502 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 TM9SF2Q99805 663 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 CD244Q9BZW8 370 aa18.07■□□□□ 0.48
CCDC40-206ENST00000572083 DDX47Q9H0S4 455 aaKnown RBP18.07■□□□□ 0.48
CCDC40-206ENST00000572083 DEFB108AA8MXU0 73 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 SNPHO15079 494 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 S100BP04271 92 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-206ENST00000572083 CT62P0C5K7 136 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 NR2F6P10588 404 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 IVDP26440 423 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 NRG3P56975 720 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 RPP38P78345 283 aaKnown RBP18.06■□□□□ 0.48
CCDC40-206ENST00000572083 PCDH1Q08174 1060 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 FASTKD3Q14CZ7 662 aaKnown RBP18.06■□□□□ 0.48
CCDC40-206ENST00000572083 DESI1Q6ICB0 168 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 HUS1BQ8NHY5 278 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 NTNG2Q96CW9 530 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 LRRC39Q96DD0 335 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 PIK3IP1Q96FE7 263 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 MCMBPQ9BTE3 642 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 METTL7AQ9H8H3 244 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 PACSIN3Q9UKS6 424 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 RNF112Q9ULX5 631 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 MTO1Q9Y2Z2 717 aaKnown RBP18.06■□□□□ 0.48
CCDC40-206ENST00000572083 JRKLQ9Y4A0 524 aa18.06■□□□□ 0.48
CCDC40-206ENST00000572083 MXRA5Q9NR99 2828 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 C2orf72A6NCS6 295 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 CTIFO43310 598 aaKnown RBP18.05■□□□□ 0.48
CCDC40-206ENST00000572083 EEDO75530 441 aaKnown RBP18.05■□□□□ 0.48
CCDC40-206ENST00000572083 AIFM1O95831 613 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 CPN1P15169 458 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 SERPINB1P30740 379 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 GCKP35557 465 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 DIO3P55073 304 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 RPS13P62277 151 aaKnown RBP18.05■□□□□ 0.48
CCDC40-206ENST00000572083 MORF4L2Q15014 288 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ACKR1Q16570 336 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ADGRE4PQ86SQ3 457 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 GALNT12Q8IXK2 581 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ACTRT1Q8TDG2 376 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ADIPOR1Q96A54 375 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 MTERF1Q99551 399 aaKnown RBP18.05■□□□□ 0.48
CCDC40-206ENST00000572083 CENPKQ9BS16 269 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 G6PC3Q9BUM1 346 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ZNF717Q9BY31 904 aaPredicted RBP18.05■□□□□ 0.48
CCDC40-206ENST00000572083 PIGMQ9H3S5 423 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 CXorf21Q9HAI6 301 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 GALNT9Q9HCQ5 603 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 KLHL28Q9NXS3 571 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 MOCS1Q9NZB8 636 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 CLCF1Q9UBD9 225 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 FETUBQ9UGM5 382 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 MAPRE3Q9UPY8 281 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 ASB4Q9Y574 426 aa18.05■□□□□ 0.48
CCDC40-206ENST00000572083 A0A1W2PR48 441 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 A8MXE2 369 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 TMPRSS11DO60235 418 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 SLC35E2BP0CK96 405 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 SLC35E2P0CK97 266 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 KRT15P19012 456 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 ABCD3P28288 659 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 GALNSP34059 522 aa18.04■□□□□ 0.48
CCDC40-206ENST00000572083 GMPRP36959 345 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms