RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ONECUT2O95948 504 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 NPPAP01160 153 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPINK2P20155 84 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 OTX2P32243 289 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 MC3RP41968 323 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TRPC1P48995 793 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 KHKP50053 298 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 CDK9P50750 372 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 BTG2P78543 158 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 IGLV3-21P80748 117 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 HPCAP84074 193 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 RHAGQ02094 409 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 EEF1A2Q05639 463 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 GAB1Q13480 694 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 CAPRIN1Q14444 709 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 RTP5Q14D33 572 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 MLC1Q15049 377 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNHIT3Q15649 155 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ELAVL1Q15717 326 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 LTB4RQ15722 352 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF750Q32MQ0 723 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TBC1D25Q3MII6 688 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SFT2D3Q587I9 215 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM64Q6YI46 380 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 BNC2Q6ZN30 1099 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF551Q7Z340 670 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TIPARPQ7Z3E1 657 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 DPP10Q8N608 796 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR5AK3PQ8NH89 298 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF675Q8TD23 568 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 KCNE4Q8WWG9 221 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 JADE3Q92613 823 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC35G5Q96KT7 338 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 LPAR4Q99677 370 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SH3GL1Q99961 368 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR8D2Q9GZM6 311 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 GLIPR2Q9H4G4 154 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPAG4Q9NPE6 437 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 EQTNQ9NQ60 294 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC22A11Q9NSA0 550 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 PTGFRNQ9P2B2 879 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 ACSL6Q9UKU0 697 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 CES1P1Q9UKY3 287 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 EXO1Q9UQ84 846 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-204ENST00000570484 IGKV3D-11A0A0A0MRZ8 115 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 TCRBV16S1A1N1A0A5B0 115 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ASPDHA6ND91 283 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 TRABD2BA6NFA1 517 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SAGE2PA6NJ88 616 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 WASHC1A8K0Z3 465 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 A8MUA0 341 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 B2RBV5 119 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PEX12O00623 359 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 FBP2O00757 339 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 EMC8O43402 210 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 BCAS2O75934 225 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SEC24DO94855 1032 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 GSNP06396 782 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 UQCRC2P22695 453 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MMP11P24347 488 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PTPN4P29074 926 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 GALNSP34059 522 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PTGER1P34995 402 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 FRKP42685 505 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZFP36L2P47974 494 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRIM2P49643 509 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRKAG1P54619 331 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 WNT3P56703 355 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 RPS18P62269 152 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 AP2B1P63010 937 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 HBA1P69905 142 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MRPS35P82673 323 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 BNIP1Q12981 228 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF267Q14586 743 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CEBPEQ15744 281 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CYP51A1Q16850 503 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MPEG1Q2M385 716 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PAGE3Q5JUK9 113 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRIF1Q5T3J3 769 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 IRAK1BP1Q5VVH5 260 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 HLA-DQA1Q5Y7H0 255 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 LCN10Q6JVE6 187 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PAPD4Q6PIY7 484 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 HACD2Q6Y1H2 254 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF517Q6ZMY9 492 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 RNF111Q6ZNA4 994 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 LANCL3Q6ZV70 420 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 MED25Q71SY5 747 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC29A4Q7RTT9 530 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPEB2Q7Z5Q1 589 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANKRD37Q7Z713 158 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM151BQ8IW70 566 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PGAM4Q8N0Y7 254 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 RBM15BQ8NDT2 890 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF248Q8NDW4 579 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 PLPP5Q8NEB5 264 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 ADCY4Q8NFM4 1077 aa6.15□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR8J3Q8NGG0 315 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms