RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LRRC37BQ96QE4 947 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 KCNK16Q96T55 309 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLCO5A1Q9H2Y9 848 aa6.32□□□□□ -1.4
SMG1-217ENST00000569764 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 GPN1Q9HCN4 374 aaPredicted RBP6.32□□□□□ -1.4
SMG1-217ENST00000569764 SLC28A2O43868 658 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DLX3O60479 287 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CSO75390 466 aaKnown RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 LCKP06239 509 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 ENO1P06733 434 aaKnown RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 OCM2P0CE71 109 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 OCMP0CE72 109 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 PTX3P26022 381 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 RCVRNP35243 200 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 UCP2P55851 309 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CLDN8P56748 225 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PSPHP78330 225 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MAPK11Q15759 364 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 RBBP7Q16576 425 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SLC5A12Q1EHB4 618 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 TMEM44Q2T9K0 475 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 GPR157Q5UAW9 335 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 KYAT3Q6YP21 454 aaKnown RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 KCTD8Q6ZWB6 473 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 ASCL5Q7RTU5 278 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 BIVMQ86UB2 503 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PKP2Q99959 881 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PCBD2Q9H0N5 130 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 BCKDKO14874 412 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SHOX2O60902 331 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 SAP30O75446 220 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DCTN3O75935 186 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 LCATP04180 440 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 FAM58BPP0C7Q3 252 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 COX7A2P14406 83 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 KDELR1P24390 212 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 GCAP28676 217 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SLC1A2P43004 574 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CEBPGP53567 150 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 STX1BP61266 288 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CXADRP78310 365 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SLC10A2Q12908 348 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 LSAMPQ13449 338 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MPP2Q14168 576 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 GPNMBQ14956 572 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 ZNHIT3Q15649 155 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 Q6ZSR6 202 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 RNF44Q7L0R7 432 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PRR11Q96HE9 360 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 ZNF419Q96HQ0 510 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 FAM71F1Q96KD3 344 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 NEU1Q99519 415 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 KATNB1Q9BVA0 655 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 OR51V1Q9H2C8 321 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MYEF2Q9P2K5 600 aaKnown RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 ERVK-18Q9QC07 812 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 HCSTQ9UBK5 93 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DAPP1Q9UN19 280 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DTX4Q9Y2E6 619 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DYRK1BQ9Y463 629 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 A0A1B0GV90 55 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 TRBC2A0A5B9 178 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 FAM187AA6NFU0 413 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 F8W036 122 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MED6O75586 246 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SNAPINO95295 136 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 FGF1P05230 155 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 ACPPP15309 386 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CRATP43155 626 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MAGEB1P43366 347 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 LSSP48449 732 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 P2RY4P51582 365 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 BST1Q10588 318 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 IL18Q14116 193 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PTPRRQ15256 657 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 VWA2Q5GFL6 755 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SLC9A4Q6AI14 798 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 CERS6Q6ZMG9 384 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SNX20Q7Z614 316 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 TMEM126BQ8IUX1 230 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 RBFAQ8N0V3 343 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG1-217ENST00000569764 L3MBTL4Q8NA19 623 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 BORCS5Q969J3 196 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 FAM162AQ96A26 154 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 MAP6Q96JE9 813 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
SMG1-217ENST00000569764 OR51B5Q9H339 312 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 RGCCQ9H4X1 137 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms