RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 SIKE1Q9BRV8 207 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 RYDENQ9NUL5 291 aaKnown RBP12.8□□□□□ -0.36
NEIL1-220ENST00000568881 GIMAP4Q9NUV9 329 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 ASIC5Q9NY37 505 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 YARS2Q9Y2Z4 477 aaKnown RBP12.8□□□□□ -0.36
NEIL1-220ENST00000568881 ZNF780BQ9Y6R6 833 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
NEIL1-220ENST00000568881 C17orf105B2RV13 164 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 POLR3GO15318 223 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 OR10H2O60403 315 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 ERAL1O75616 437 aaKnown RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 DDAH2O95865 285 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 DDCP20711 480 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 TRHRP34981 398 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 HPCAL1P37235 193 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 RPL3P39023 403 aaKnown RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 CD96P40200 585 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 STT3AP46977 705 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 HLCSP50747 726 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 SSR4P51571 173 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 PER3P56645 1201 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 IGLV3-21P80748 117 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 MRPL49Q13405 166 aaKnown RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 EIF2S3LQ2VIR3 472 aaKnown RBP12.79□□□□□ -0.36
NEIL1-220ENST00000568881 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 SLC25A25Q6KCM7 469 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 MMP21Q8N119 569 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 OR8K3Q8NH51 312 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 NR4A3Q92570 626 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 UCN3Q969E3 161 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 OR8D2Q9GZM6 311 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 ANKRD10Q9NXR5 420 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 HEY2Q9UBP5 337 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 UTS2RQ9UKP6 389 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 CES1P1Q9UKY3 287 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 MAPRE3Q9UPY8 281 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 NTNG1Q9Y2I2 539 aa12.79□□□□□ -0.36
NEIL1-220ENST00000568881 WASHC1A8K0Z3 465 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 TGFBR3LH3BV60 316 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 AKAP10O43572 662 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ITGA10O75578 1167 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SLC25A12O75746 678 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SP1P08047 785 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 G6PDP11413 515 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 IDH3AP50213 366 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 XKP51811 444 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 MAPKAPK3Q16644 382 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SPINK14Q6IE38 97 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 R3HCC1LQ7Z5L2 792 aaKnown RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ST13P4Q8IZP2 240 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 CYP4Z2PQ8N1L4 340 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 CLHC1Q8NHS4 586 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 GFM2Q969S9 779 aaKnown RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 EXOSC8Q96B26 276 aaKnown RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 MTERF3Q96E29 417 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 OR52B2Q96RD2 323 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 PRPF18Q99633 342 aaKnown RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SLX1AQ9BQ83 275 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SLC35C2Q9NQQ7 365 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 KLHL1Q9NR64 748 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 TAS2R7Q9NYW3 318 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ERVK-11Q9UQG0 969 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ENTPD4Q9Y227 616 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SLC5A6Q9Y289 635 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 KLF13Q9Y2Y9 288 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-220ENST00000568881 CLDN16Q9Y5I7 305 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 SHANK1Q9Y566 2161 aa12.78□□□□□ -0.36
NEIL1-220ENST00000568881 ESPL1Q14674 2120 aa12.77□□□□□ -0.36
NEIL1-220ENST00000568881 MYOCOSA0A1B0GUC4 107 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 CLEC18AA5D8T8 446 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 A8MVJ9 347 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 KLRC4-KLRK1H3BQV0 150 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 LRATO95237 230 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 CPMP14384 443 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 GALNSP34059 522 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 FEN1P39748 380 aaKnown RBP12.77□□□□□ -0.37
NEIL1-220ENST00000568881 GYS2P54840 703 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 DIO3P55073 304 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 CASP6P55212 293 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 CLDN8P56748 225 aa12.77□□□□□ -0.37
NEIL1-220ENST00000568881 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
NEIL1-220ENST00000568881 PTGR1Q14914 329 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms