RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CXorf21Q9HAI6 301 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 TEX10Q9NXF1 929 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 NDRG3Q9UGV2 375 aa14.39□□□□□ -0.11
HERPUD1-215ENST00000568676 CCDC189A1A4V9 331 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SH3D21A4FU49 640 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 KDM4EB2RXH2 506 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 CASKO14936 926 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 UGDHO60701 494 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SH3BGRLO75368 114 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 CLPSP04118 112 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 RHOXF2BP0C7M4 288 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 KRT15P19012 456 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 CHMP24386 653 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 GP5P40197 560 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 PCYT1AP49585 367 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 FBXW4P57775 412 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 FUT7Q11130 342 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SNTA1Q13424 505 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 GAB1Q13480 694 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 DDX39BQ13838 428 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 FASTKD3Q14CZ7 662 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SETDB1Q15047 1291 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 TOMM20Q15388 145 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 C6orf163Q5TEZ5 329 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 TIGD3Q6B0B8 471 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 OR52E8Q6IFG1 317 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 ENPP6Q6UWR7 440 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 CAPN12Q6ZSI9 719 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 KRTAP1-3Q8IUG1 177 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 GALNT12Q8IXK2 581 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 ZBED8Q8IZ13 594 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 OR1J4Q8NGS1 313 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 PIGTQ969N2 578 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SMR3AQ99954 134 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SORBS1Q9BX66 1292 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 ZNF395Q9H8N7 513 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 NMRAL1Q9HBL8 299 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 EIF3LQ9Y262 564 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 CFL2Q9Y281 166 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 SLC6A5Q9Y345 797 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 ASB4Q9Y574 426 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 VPS13CQ709C8 3753 aa14.38□□□□□ -0.11
HERPUD1-215ENST00000568676 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 H0YIV9 168 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 KERAO60938 352 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 RCBTB2O95199 551 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 LRATO95237 230 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 FAM58BPP0C7Q3 252 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 PTPN6P29350 595 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 CPA2P48052 419 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 DIO3P55073 304 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 SLC30A6Q6NXT4 461 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 PRSS57Q6UWY2 283 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 ISCA2Q86U28 154 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 P3H2Q8IVL5 708 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 OR7G1Q8NGA0 311 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 PYROXD1Q8WU10 500 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 NUDT8Q8WV74 236 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 EXT2Q93063 718 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 ADIPOR1Q96A54 375 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 MTERF1Q99551 399 aaKnown RBP14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 ALG9Q9H6U8 611 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 SMYD2Q9NRG4 433 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 ANGPTL3Q9Y5C1 460 aa14.37□□□□□ -0.11
HERPUD1-215ENST00000568676 NSD1Q96L73 2696 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 A0A1W2PR48 441 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 SYCE1LA8MT33 242 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 SUPT3HB4E1H0 165 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 TP73O15350 636 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 ZSCAN12O43309 604 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 SUPT3HO75486 399 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 PIK3R1P27986 724 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 SSTR4P31391 388 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 SPRP35270 261 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 BSGP35613 385 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 NAGLUP54802 743 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 RPS13P62277 151 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 EIPR1Q53HC9 387 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 WIPI1Q5MNZ9 446 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 BICRALQ6AI39 1079 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 Q71RC1 249 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 CCDC91Q7Z6B0 441 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 ADGRE4PQ86SQ3 457 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 CXorf67Q86X51 503 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 MYLK4Q86YV6 388 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 KLHL7Q8IXQ5 586 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 ZNF615Q8N8J6 731 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 C9orf106Q8NAJ2 232 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 FAM83FQ8NEG4 500 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 WNT2BQ93097 391 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 UCN3Q969E3 161 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 COX4I2Q96KJ9 171 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 ATOH8Q96SQ7 321 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 ZNF717Q9BY31 904 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 OR10A5Q9H207 317 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
HERPUD1-215ENST00000568676 NINQ8N4C6 2090 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms