RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 LRRC74AQ0VAA2 488 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF750Q32MQ0 723 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 LSM12Q3MHD2 195 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 PDCD4Q53EL6 469 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF385BQ569K4 471 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF628Q5EBL2 1059 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 HLA-DQA1Q5Y7H0 255 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ANKRD26P1Q6NSI1 321 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 DGAT2L6Q6ZPD8 337 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 LINC00696Q6ZRV3 163 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 RIMKLAQ8IXN7 391 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 HORMAD2Q8N7B1 307 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 GLB1L3Q8NCI6 653 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 SUN3Q8TAQ9 357 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 SLC22A8Q8TCC7 542 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 CTHRC1Q96CG8 243 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 AMDHD1Q96NU7 426 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 GAL3ST4Q96RP7 486 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 DUSP26Q9BV47 211 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 NSRP1Q9H0G5 558 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 OR10A5Q9H207 317 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 MRGBPQ9NV56 204 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 FGFR1OP2Q9NVK5 253 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 TAS2R9Q9NYW1 312 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 PRODH2Q9UF12 536 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 BCAP29Q9UHQ4 241 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF223Q9UK11 482 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 TRIM33Q9UPN9 1127 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 CHD6Q8TD26 2715 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ZFYVE26Q68DK2 2539 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 A0A087WV62 115 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 A0A0G2JND7 137 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 C2orf92A0A1B0GVN3 265 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 E9PBE3 544 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 PLOD2O00469 737 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 PLOD3O60568 738 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 CT62P0C5K7 136 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 SSTR4P31391 388 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 FRKP42685 505 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 KIR3DL1P43629 444 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 TMED10P49755 219 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 IDH3AP50213 366 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 SSR4P51571 173 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 MLF1P58340 268 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 MRPS35P82673 323 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 PRR5P85299 388 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 DUSP2Q05923 314 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 KLRB1Q12918 225 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 HSPB3Q12988 150 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 MLC1Q15049 377 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 EBPQ15125 230 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 LTB4RQ15722 352 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 B3GNTL1Q67FW5 361 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 FCRLBQ6BAA4 426 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 C9orf40Q8IXQ3 194 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 GPALPP1Q8IXQ4 340 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 DND1Q8IYX4 353 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 BEST3Q8N1M1 668 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 KRTCAP2Q8N6L1 136 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 C17orf47Q8NEP4 570 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 ADCY4Q8NFM4 1077 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 OR7A2PQ8NGA2 310 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 OR8J2Q8NGG1 315 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 THAP3Q8WTV1 239 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 CIDECQ96AQ7 238 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 COQ8BQ96D53 544 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 RILPQ96NA2 401 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 OR52B2Q96RD2 323 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 EBF4Q9BQW3 602 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 UTP23Q9BRU9 249 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 WWTR1Q9GZV5 400 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 GLIPR2Q9H4G4 154 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 CDCP1Q9H5V8 836 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 CLMPQ9H6B4 373 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 STMN3Q9NZ72 180 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 MYOTQ9UBF9 498 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 YARS2Q9Y2Z4 477 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 KALRNO60229 2985 aa11.3□□□□□ -0.6
SF3B3-208ENST00000567250 TLN1Q9Y490 2541 aaKnown RBP11.3□□□□□ -0.6
SF3B3-208ENST00000567250 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 HRKO00198 91 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 ITGA10O75578 1167 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 PDGFAP04085 211 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 MC3RP41968 323 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
SF3B3-208ENST00000567250 NRG3P56975 720 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 DCAF7P61962 342 aa11.29□□□□□ -0.6
SF3B3-208ENST00000567250 TLR1Q15399 786 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms