RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C6orf163Q5TEZ5 329 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 VASNQ6EMK4 673 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 TMEM81Q6P7N7 255 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 LACC1Q8IV20 430 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 PTGR2Q8N8N7 351 aaPredicted RBP13.74□□□□□ -0.21
RNF40-209ENST00000566703 ISL2Q96A47 359 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 MRRFQ96E11 262 aaKnown RBP13.74□□□□□ -0.21
RNF40-209ENST00000566703 TMEM41AQ96HV5 264 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 FOXC2Q99958 501 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 TSPYL1Q9H0U9 437 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 OR10A5Q9H207 317 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 VPS11Q9H270 941 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 UBQLN3Q9H347 655 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 ACSS3Q9H6R3 686 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 CFL2Q9Y281 166 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 C15orf38-AP3S2A0A0A6YYH1 394 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 CD8B2A6NJW9 211 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 ACSL3O95573 720 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 IL2RAP01589 272 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 KLK1P06870 262 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 CPMP14384 443 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 S1PR1P21453 382 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 NT5EP21589 574 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 MAGEA12P43365 314 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 ASCL1P50553 236 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 IST1P53990 364 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 FBXW4P57775 412 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 IFT88Q13099 833 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 UAP1Q16222 522 aaPredicted RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 TSNAXIP1Q2TAA8 658 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 GGTA1PQ4G0N0 100 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 CCNYL2Q5T2Q4 361 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 NUP54Q7Z3B4 507 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 PLD6Q8N2A8 252 aaKnown RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 METTL4Q8N3J2 472 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 OR52B6Q8NGF0 335 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 FAM222BQ8WU58 562 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 RNASE6Q93091 150 aaKnown RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 RILPQ96NA2 401 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 CDK15Q96Q40 435 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 PRDM14Q9GZV8 571 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 CXXC4Q9H2H0 198 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 ZBTB26Q9HCK0 441 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 TEX10Q9NXF1 929 aaPredicted RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 MTRF1LQ9UGC7 380 aaKnown RBP13.73□□□□□ -0.21
RNF40-209ENST00000566703 PCTPQ9UKL6 214 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 PCDHA9Q9Y5H5 950 aa13.73□□□□□ -0.21
RNF40-209ENST00000566703 C1orf226A1L170 272 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 GOLGA6L10A6NI86 522 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 SMIM24O75264 130 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 TRAPPC6AO75865 159 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 ABCB1P08183 1280 aaPredicted RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 CT62P0C5K7 136 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 KRT15P19012 456 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 ARL1P40616 181 aaPredicted RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 MASP1P48740 699 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 SERPINB9P50453 376 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 SLC7A5Q01650 507 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 CKAP4Q07065 602 aaKnown RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 TRAF3Q13114 568 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 DAZAP2Q15038 168 aaPredicted RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 FNDC7Q5VTL7 733 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 NSUN5P2Q63ZY6 315 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 TIGD3Q6B0B8 471 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 TMEM64Q6YI46 380 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 MILR1Q7Z6M3 343 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 RELL2Q8NC24 303 aaPredicted RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 SLC44A1Q8WWI5 657 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 PHF21BQ96EK2 531 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 HSPBAP1Q96EW2 488 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 GNRHR2Q96P88 292 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 POLDIP3Q9BY77 421 aaKnown RBP13.72□□□□□ -0.21
RNF40-209ENST00000566703 CALHM2Q9HA72 323 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 RASSF1Q9NS23 344 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 NMRK1Q9NWW6 199 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 CES1P1Q9UKY3 287 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 C15orf41Q9Y2V0 281 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
RNF40-209ENST00000566703 TEP1Q99973 2627 aaKnown RBP13.71□□□□□ -0.21
RNF40-209ENST00000566703 A0A1W2PS29 197 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 PPM1BO75688 479 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 IL18BPO95998 194 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 ATP1B1P05026 303 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 INHBAP08476 426 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 RHOXF2BP0C7M4 288 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 CSNK2A2P19784 350 aaPredicted RBP13.71□□□□□ -0.21
RNF40-209ENST00000566703 BMP5P22003 454 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 GPX3P22352 226 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 CNTFP26441 200 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 ABCD3P28288 659 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 UQCRC1P31930 480 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 DEKP35659 375 aaKnown RBP13.71□□□□□ -0.21
RNF40-209ENST00000566703 MAPK12P53778 367 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 TRA2BP62995 288 aaKnown RBP13.71□□□□□ -0.21
RNF40-209ENST00000566703 SNTA1Q13424 505 aa13.71□□□□□ -0.21
RNF40-209ENST00000566703 PRICKLE4Q2TBC4 344 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms