RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 DIP2BQ9P265 1576 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 PPP1R2P9O14990 202 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 FMO6PO60774 539 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 RAB40ALP0C0E4 278 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 PPP3CBP16298 524 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 CHRNA4P43681 627 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 SIRPB2Q5JXA9 342 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 NANOGP8Q6NSW7 305 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 PAQR3Q6TCH7 311 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 SLC51AQ86UW1 340 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 RAB40AQ8WXH6 277 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 NANOS1Q8WY41 292 aaKnown RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 IL12RB2Q99665 862 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 OR52A5Q9H2C5 316 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 NANOGQ9H9S0 305 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 FZD3Q9NPG1 666 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 TXNL4BQ9NX01 149 aaKnown RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 SPATA31D1Q6ZQQ2 1576 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 SOX1O00570 391 aaPredicted RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 PMM2O15305 246 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 ADAM12O43184 909 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 GNSP15586 552 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 LSSP48449 732 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 AGAP7PQ5VUJ5 663 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 HIST2H3AQ71DI3 136 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 TMEM139Q8IV31 216 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 C2orf73Q8N5S3 287 aaPredicted RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 ZNF611Q8N823 705 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 OR5B17Q8NGF7 314 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 RHEBL1Q8TAI7 183 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 OR5P2Q8WZ92 322 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 ST6GALNAC4Q9H4F1 302 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 EVLQ9UI08 416 aaPredicted RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 FZD10Q9ULW2 581 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 ABCC6O95255 1503 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 EEF1E1-BLOC1S5C9J1V9 151 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 TGFB1I1O43294 461 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 ERI3O43414 337 aaKnown RBP4.88□□□□□ -1.63
SMG1-211ENST00000565324 EBLN1P0CF75 366 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 DSC2Q02487 901 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 KEAP1Q14145 624 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 PCGF3Q3KNV8 242 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 C19orf35Q6ZS72 473 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 C6orf120Q7Z4R8 191 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 GPC2Q8N158 579 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 RCBTB1Q8NDN9 531 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 ZNF417Q8TAU3 575 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 EBF4Q9BQW3 602 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 B3GALT1Q9Y5Z6 326 aa4.88□□□□□ -1.63
SMG1-211ENST00000565324 A0A087WUU8 490 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 A0A1B0GVT2 93 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 LRP5LA4QPB2 252 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 TISP43B9A030 160 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 MANBAO00462 879 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 SMAD9O15198 467 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 ZBTB7AO95365 584 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 DCNP07585 359 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 GABRR2P28476 465 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 FAM162BQ5T6X4 162 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 METAP1DQ6UB28 335 aaPredicted RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 CFAP77Q6ZQR2 320 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 ZNF546Q86UE3 836 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 RNF130Q86XS8 419 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 OR4K14Q8NGD5 310 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 OR9A4Q8NGU2 314 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 KCTD12Q96CX2 325 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 PTPN18Q99952 460 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 PCM1Q15154 2024 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 PARP4Q9UKK3 1724 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 A0A0U1RQJ8 604 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 TSPAN11A1L157 253 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 NUDT19A8MXV4 375 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 SAP18O00422 153 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 VEGFDO43915 354 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 C4BPAP04003 597 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 HSD17B1P14061 328 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 ADH7P40394 386 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 IRF9Q00978 393 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 CRYZQ08257 329 aaKnown RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 SELPLGQ14242 412 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 GALNT10Q86SR1 603 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 CD163Q86VB7 1156 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 LRRC28Q86X40 367 aaPredicted RBP4.87□□□□□ -1.63
SMG1-211ENST00000565324 DCUN1D3Q8IWE4 304 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 B3GNT7Q8NFL0 401 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 OR5AK2Q8NH90 309 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 OR1S1Q8NH92 325 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 OR1E3Q8WZA6 343 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 WDR26Q9H7D7 661 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 EDDM13A0A1B0GTR0 161 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 RPS10-NUDT3A0A1W2PQS6 291 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 MTMR11A4FU01 709 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 H3BMQ9 156 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 RFXAPO00287 272 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 ELK4P28324 431 aa4.87□□□□□ -1.63
SMG1-211ENST00000565324 RPS10P46783 165 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms