RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ACAD8Q9UKU7 415 aa17.03■□□□□ 0.32
CLN6-204ENST00000564752 STK38LQ9Y2H1 464 aa17.03■□□□□ 0.32
CLN6-204ENST00000564752 SPG11Q96JI7 2443 aa17.03■□□□□ 0.32
CLN6-204ENST00000564752 ZFHX3Q15911 3703 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 SMIM23A6NLE4 172 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 WASHC1A8K0Z3 465 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 HCN1O60741 890 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 GLRA3O75311 464 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 KRT15P19012 456 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 IMPDH1P20839 514 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 MAPK12P53778 367 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 PRKAA2P54646 552 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 ERVK-8P63133 956 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 TBL3Q12788 808 aaKnown RBP17.02■□□□□ 0.32
CLN6-204ENST00000564752 SPRED3Q2MJR0 410 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 COMMD6Q7Z4G1 85 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 CDYL2Q8N8U2 506 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 DOK4Q8TEW6 326 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.02■□□□□ 0.322e-7■■■■■ 68.1
CLN6-204ENST00000564752 RIT1Q92963 219 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 SARAFQ96BY9 339 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 HBEGFQ99075 208 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 LDAHQ9H6V9 325 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 PROK2Q9HC23 129 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 RYDENQ9NUL5 291 aaKnown RBP17.02■□□□□ 0.32
CLN6-204ENST00000564752 NMRK1Q9NWW6 199 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 ZNF225Q9UK10 706 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 ERVK-19Q9WJR5 959 aa17.02■□□□□ 0.32
CLN6-204ENST00000564752 INTS1Q8N201 2190 aaKnown RBP17.01■□□□□ 0.31
CLN6-204ENST00000564752 TRGV5A0A0B4J1U4 118 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 WDR1O75083 606 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 GUCY1B2O75343 617 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 KRT6AP02538 564 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 KRT6BP04259 564 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 FBXO45P0C2W1 286 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 RFPL3SP0C7P2 107 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 PIK3R1P27986 724 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 HMOX2P30519 316 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 KRT6CP48668 564 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 SLC37A1P57057 533 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 ZNF267Q14586 743 aaPredicted RBP17.01■□□□□ 0.31
CLN6-204ENST00000564752 TCHHL1Q5QJ38 904 aaPredicted RBP17.01■□□□□ 0.31
CLN6-204ENST00000564752 FAM219BQ5XKK7 198 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 SPNS3Q6ZMD2 512 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 DND1Q8IYX4 353 aaKnown RBP17.01■□□□□ 0.31
CLN6-204ENST00000564752 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 UCN3Q969E3 161 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 L3HYPDHQ96EM0 354 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 ZFP64Q9NPA5 681 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 CNIH4Q9P003 139 aa17.01■□□□□ 0.31
CLN6-204ENST00000564752 CHCHD2Q9Y6H1 151 aaPredicted RBP17.01■□□□□ 0.31
CLN6-204ENST00000564752 A0A0G2JNJ9 132 aa17■□□□□ 0.31
CLN6-204ENST00000564752 MANBAO00462 879 aa17■□□□□ 0.31
CLN6-204ENST00000564752 PGRMC2O15173 223 aa17■□□□□ 0.31
CLN6-204ENST00000564752 SLC35E2P0CK97 266 aa17■□□□□ 0.31
CLN6-204ENST00000564752 MYL2P10916 166 aa17■□□□□ 0.31
CLN6-204ENST00000564752 HSD3B1P14060 373 aa17■□□□□ 0.31
CLN6-204ENST00000564752 ENDOUP21128 410 aaKnown RBP17■□□□□ 0.31
CLN6-204ENST00000564752 HSD3B2P26439 372 aa17■□□□□ 0.31
CLN6-204ENST00000564752 SERPINB3P29508 390 aa17■□□□□ 0.31
CLN6-204ENST00000564752 GALNSP34059 522 aa17■□□□□ 0.31
CLN6-204ENST00000564752 ZFP36L2P47974 494 aaKnown RBP17■□□□□ 0.31
CLN6-204ENST00000564752 GALNT1Q10472 559 aaPredicted RBP17■□□□□ 0.31
CLN6-204ENST00000564752 CSTF3Q12996 717 aaKnown RBP17■□□□□ 0.31
CLN6-204ENST00000564752 LCP2Q13094 533 aa17■□□□□ 0.31
CLN6-204ENST00000564752 WLSQ5T9L3 541 aa17■□□□□ 0.31
CLN6-204ENST00000564752 PRAMEF20Q5VT98 475 aa17■□□□□ 0.31
CLN6-204ENST00000564752 SLC29A4Q7RTT9 530 aa17■□□□□ 0.31
CLN6-204ENST00000564752 TDRPQ86YL5 185 aa17■□□□□ 0.31
CLN6-204ENST00000564752 EPS8L3Q8TE67 593 aaKnown RBP17■□□□□ 0.31
CLN6-204ENST00000564752 CCDC126Q96EE4 140 aa17■□□□□ 0.31
CLN6-204ENST00000564752 GAL3ST4Q96RP7 486 aa17■□□□□ 0.31
CLN6-204ENST00000564752 WWTR1Q9GZV5 400 aa17■□□□□ 0.31
CLN6-204ENST00000564752 ZNF703Q9H7S9 590 aaPredicted RBP17■□□□□ 0.31
CLN6-204ENST00000564752 SPRR3Q9UBC9 169 aa17■□□□□ 0.31
CLN6-204ENST00000564752 Q9UFV3 132 aa17■□□□□ 0.31
CLN6-204ENST00000564752 KCNN3Q9UGI6 736 aa17■□□□□ 0.31
CLN6-204ENST00000564752 EMCNQ9ULC0 261 aa17■□□□□ 0.31
CLN6-204ENST00000564752 BOKQ9UMX3 212 aaPredicted RBP17■□□□□ 0.31
CLN6-204ENST00000564752 LRRC3CA6NJW4 275 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 OR6C76A6NM76 312 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 CLPSP04118 112 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 ADH7P40394 386 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 PKNOX1P55347 436 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 KCNJ2P63252 427 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 EBPQ15125 230 aaKnown RBP16.99■□□□□ 0.31
CLN6-204ENST00000564752 C6orf163Q5TEZ5 329 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 ZYG11AQ6WRX3 759 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 LIX1LQ8IVB5 337 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 GALNT12Q8IXK2 581 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 CLYBLQ8N0X4 340 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 LRRC25Q8N386 305 aaPredicted RBP16.99■□□□□ 0.31
CLN6-204ENST00000564752 C1orf52Q8N6N3 182 aaKnown RBP16.99■□□□□ 0.31
CLN6-204ENST00000564752 CCNYL1Q8N7R7 359 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 FAM13CQ8NE31 585 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 OR10G3Q8NGC4 313 aa16.99■□□□□ 0.31
CLN6-204ENST00000564752 OR4K14Q8NGD5 310 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms