RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 NPFFR2Q9Y5X5 522 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 LIPGQ9Y5X9 500 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 HCFC1P51610 2035 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 NKX2-6A6NCS4 301 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 HSPB2A8KAH6 182 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ACSL3O95573 720 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 CLPSP04118 112 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 RPS17P08708 135 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 CELA3AP09093 270 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 HSD3B1P14060 373 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 POU3F2P20265 443 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 HSD3B2P26439 372 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 MAPK12P53778 367 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 DCAF7P61962 342 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 MAP4K2Q12851 820 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 TRAF3Q13114 568 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 HSPB2Q16082 182 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 TMEM81Q6P7N7 255 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 TIFABQ6ZNK6 161 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 NUP54Q7Z3B4 507 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 PM20D2Q8IYS1 436 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 SPPL2AQ8TCT8 520 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 DIO2Q92813 273 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 LRRC46Q96FV0 321 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF597Q96LX8 424 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF559Q9BR84 538 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 FAIM2Q9BWQ8 316 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ANGPTL4Q9BY76 406 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 XPR1Q9UBH6 696 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 TNFRSF10DQ9UBN6 386 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 CES1P1Q9UKY3 287 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 PCDHA9Q9Y5H5 950 aa11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-204ENST00000564664 SPG11Q96JI7 2443 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 LRRC3CA6NJW4 275 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 FAM90A27PA6NNH2 459 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SYT5O00445 386 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 ACOX3O15254 700 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 BCAS2O75934 225 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 EPPINO95925 133 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 GBAP04062 536 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 ATP1B1P05026 303 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 HPNP05981 417 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 RFPL3SP0C7P2 107 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 CTAGE8P0CG41 777 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 KRT15P19012 456 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 TAC1P20366 129 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 S1PR1P21453 382 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 NT5EP21589 574 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 GDF1P27539 372 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SSTR4P31391 388 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 HSD17B3P37058 310 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 PSPHP78330 225 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SNTA1Q13424 505 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 NHSL2Q5HYW2 709 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SLC48A1Q6P1K1 146 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SPNS3Q6ZMD2 512 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 CDH24Q86UP0 819 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 CTAGE4Q8IX94 777 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SAMD14Q8IZD0 417 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 TMEM151AQ8N4L1 468 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 DCAKDQ8WVC6 231 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SELENOMQ8WWX9 145 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 TM4SF18Q96CE8 201 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 NTNG2Q96CW9 530 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 ERP27Q96DN0 273 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 DTNBP1Q96EV8 351 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 HSPBAP1Q96EW2 488 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 JSRP1Q96MG2 331 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 MRPL1Q9BYD6 325 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 TEX10Q9NXF1 929 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 ALKBH4Q9NXW9 302 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 VPS29Q9UBQ0 182 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 PRODH2Q9UF12 536 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 Q9UFV3 132 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 FETUBQ9UGM5 382 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 NFU1Q9UMS0 254 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 SLC12A4Q9UP95 1085 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 STK38LQ9Y2H1 464 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 CSMD2Q7Z408 3487 aa11.18□□□□□ -0.62
GTF3C1-204ENST00000564664 F8P00451 2351 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ANKRD17O75179 2603 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 CCDC151A5D8V7 595 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 TRIM49D1C9J1S8 452 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 POC1B-GALNT4F8VUJ3 575 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 PDYNP01213 254 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 KRT6AP02538 564 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 KRT6BP04259 564 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ABCB1P08183 1280 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ABHD2P08910 425 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms