RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR4D2P58180 307 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 RPS15P62841 145 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 LIPEQ05469 1076 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 DUSP2Q05923 314 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PRICKLE4Q2TBC4 344 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 SERPINA11Q86U17 422 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 SLC15A3Q8IY34 581 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 ENDOVQ8N8Q3 282 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 ADCY4Q8NFM4 1077 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 OR2Y1Q8NGV0 311 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PNPT1Q8TCS8 783 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 CCDC124Q96CT7 223 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 ELP4Q96EB1 424 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 MAGED4Q96JG8 741 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 SLC46A1Q96NT5 459 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 CNPPD1Q9BV87 410 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 TRIM15Q9C019 465 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 CXorf21Q9HAI6 301 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PNO1Q9NRX1 252 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 SLC6A13Q9NSD5 602 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 CMTM6Q9NX76 183 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 MAT2BQ9NZL9 334 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 SUCOQ9UBS9 1254 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 COPS7AQ9UBW8 275 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 BCAP29Q9UHQ4 241 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 CFL2Q9Y281 166 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PTRH2Q9Y3E5 179 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 CLCA3PQ9Y6N3 262 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 NUP210LQ5VU65 1888 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 TEX51A0A1B0GUA7 166 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 DCDC2BA2VCK2 349 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 TGFBR3LH3BV60 316 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 AGR2O95994 175 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 GPX2P18283 190 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 STAT5AP42229 794 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 PGDP52209 483 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 PRKAG1P54619 331 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 KCNJ2P63252 427 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 MRPS35P82673 323 aaKnown RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 MAP4K2Q12851 820 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 ZNF155Q12901 538 aaPredicted RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 RGNQ15493 299 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 ZNHIT3Q15649 155 aaPredicted RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 PIGGQ5H8A4 983 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 GCNT6Q5T4J0 391 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 SHISA6Q6ZSJ9 500 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 C6orf120Q7Z4R8 191 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 RNF130Q86XS8 419 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 SLC30A8Q8IWU4 369 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 NUP43Q8NFH3 380 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 OR7G1Q8NGA0 311 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 CT55Q8WUE5 264 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 JADE3Q92613 823 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 KAT2AQ92830 837 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 KIAA1143Q96AT1 154 aaPredicted RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 ASB9Q96DX5 294 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 REXO5Q96IC2 774 aaKnown RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 FBXL20Q96IG2 436 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 GPR87Q9BY21 358 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 KAT8Q9H7Z6 458 aaKnown RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 NTMQ9P121 344 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 PRODH2Q9UF12 536 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 KCND3Q9UK17 655 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 C19orf53Q9UNZ5 99 aaPredicted RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
CLK3-214ENST00000564096 RIF1Q5UIP0 2472 aaKnown RBP11.98□□□□□ -0.49
CLK3-214ENST00000564096 PRORSD1PA6NEY8 169 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 TTC36A6NLP5 189 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 DUXAA6NLW8 204 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 CDRT15L2A8MXV6 281 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 H0YHG0 523 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 UPK1AO00322 258 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 GSTA4O15217 222 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ASNA1O43681 348 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 SOX30O94993 753 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 RECKO95980 971 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 TCN2P20062 427 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 GSK3BP49841 420 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 DSTNP60981 165 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 HPCAP84074 193 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 DNASE1L3Q13609 305 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 CEACAM7Q14002 265 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 SELPLGQ14242 412 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 GNA13Q14344 377 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ZNF267Q14586 743 aaPredicted RBP11.97□□□□□ -0.49
CLK3-214ENST00000564096 PUM1Q14671 1186 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLK3-214ENST00000564096 LASP1Q14847 261 aaKnown RBP11.97□□□□□ -0.49
CLK3-214ENST00000564096 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLK3-214ENST00000564096 C1orf146Q5VVC0 180 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 LCN10Q6JVE6 187 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 FAM199XQ6PEV8 388 aaPredicted RBP11.97□□□□□ -0.49
CLK3-214ENST00000564096 ZCCHC12Q6PEW1 402 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 FAM111BQ6SJ93 734 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 GPR155Q7Z3F1 870 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ANKRD37Q7Z713 158 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms