RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MAPRE3Q9UPY8 281 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 EIF3LQ9Y262 564 aaKnown RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
USB1-208ENST00000563207 CLDN16Q9Y5I7 305 aa14.56□□□□□ -0.08
USB1-208ENST00000563207 DCHS2Q6V1P9 2916 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 PRSS44E7EML9 344 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 CCL21O00585 134 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 PGRMC2O15173 223 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 LDB3O75112 727 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 CRYABP02511 175 aaKnown RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 JUNP05412 331 aaKnown RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 IL3P08700 152 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 DDCP20711 480 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 GALNSP34059 522 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 PER3P56645 1201 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 ERVK-8P63133 956 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 HSF1Q00613 529 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 OC90Q02509 493 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 FOLH1Q04609 750 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 C2orf80Q0P641 193 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 ELAVL1Q15717 326 aaKnown RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 C3AR1Q16581 482 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 FAM71E1Q6IPT2 247 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 OGFOD2Q6N063 350 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 LARP4Q71RC2 724 aaKnown RBP eCLIP14.55□□□□□ -0.08
USB1-208ENST00000563207 GALNTL5Q7Z4T8 443 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 ST13P4Q8IZP2 240 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 THAP3Q8WTV1 239 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 RBM18Q96H35 190 aaKnown RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 ZNF764Q96H86 408 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 SIKE1Q9BRV8 207 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 EBPLQ9BY08 206 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 SLCO1B3Q9NPD5 702 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 TAS2R7Q9NYW3 318 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 NOP53Q9NZM5 478 aaKnown RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 MARCOQ9UEW3 520 aaPredicted RBP14.55□□□□□ -0.08
USB1-208ENST00000563207 TINAGQ9UJW2 476 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 CES1P1Q9UKY3 287 aa14.55□□□□□ -0.08
USB1-208ENST00000563207 NPIPA5E9PKD4 350 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 SDHDO14521 159 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 DYRK3O43781 588 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 FGF17O60258 216 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 SLC35E2P0CK97 266 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 BCKDHAP12694 445 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 COX7A2P14406 83 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 ALOX15P16050 662 aaPredicted RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 LBPP18428 481 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 SDC1P18827 310 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 RPL3P39023 403 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 MDH1P40925 334 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 CA7P43166 264 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 STT3AP46977 705 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 NR0B1P51843 470 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 PLIN5Q00G26 463 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 C16orf47Q6ZP98 133 aaPredicted RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 CLNKQ7Z7G1 428 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 RPS19BP1Q86WX3 136 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 OR14A16Q8NHC5 309 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 ACTRT2Q8TDY3 377 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 STON2Q8WXE9 905 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 DAZLQ92904 295 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 MARVELD3Q96A59 401 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 MTERF3Q96E29 417 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 MAELQ96JY0 434 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 FRMD6Q96NE9 622 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 LIN28AQ9H9Z2 209 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 LRFN1Q9P244 771 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 ZNF223Q9UK11 482 aaPredicted RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 NPIPA1Q9UND3 350 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 PPIEQ9UNP9 301 aaKnown RBP14.54□□□□□ -0.08
USB1-208ENST00000563207 USH1CQ9Y6N9 552 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 ZNF780BQ9Y6R6 833 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 APCP25054 2843 aa14.54□□□□□ -0.08
USB1-208ENST00000563207 CSMD1Q96PZ7 3565 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 SAGE2PA6NJ88 616 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 GLOD5A6NK44 160 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 ZNF195O14628 629 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 SLC19A2O60779 497 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 TBX19O60806 448 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 EDF1O60869 148 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 PRKRAO75569 313 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 IFNA16P05015 189 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 SP1P08047 785 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 PORP16435 677 aaPredicted RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 CSNK2A2P19784 350 aaPredicted RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 RFC3P40938 356 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 ALDH9A1P49189 494 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 XKP51811 444 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 ADORA2A-AS1P86434 159 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 MAPKAPK3Q16644 382 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 IL23RQ5VWK5 629 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 R3HCC1LQ7Z5L2 792 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 SPATA19Q7Z5L4 167 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 MRGPRGQ86SM5 289 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 SIAH3Q8IW03 269 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 CHERPQ8IWX8 916 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 CPSF7Q8N684 471 aaKnown RBP14.53□□□□□ -0.08
USB1-208ENST00000563207 SLC5A8Q8N695 610 aa14.53□□□□□ -0.08
USB1-208ENST00000563207 CEP70Q8NHQ1 597 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms