RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 KIF18BQ86Y91 864 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 ZNF441Q8N8Z8 693 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 UCN3Q969E3 161 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 ATP6V1E2Q96A05 226 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GNRHR2Q96P88 292 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 ALPK1Q96QP1 1244 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 YIPF4Q9BSR8 244 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 ZNF717Q9BY31 904 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 OR10A5Q9H207 317 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 EPB41L4BQ9H329 900 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 DDX31Q9H8H2 851 aaKnown RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 METTL7AQ9H8H3 244 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 IPPKQ9H8X2 491 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CXorf21Q9HAI6 301 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 C15orf41Q9Y2V0 281 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 UTP11Q9Y3A2 253 aaKnown RBP11.89□□□□□ -0.51
SF3B3-202ENST00000562722 RNF11Q9Y3C5 154 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 TSC22D4Q9Y3Q8 395 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 NF1P21359 2839 aa11.89□□□□□ -0.51
SF3B3-202ENST00000562722 A0A1W2PS29 197 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 GNB5O14775 395 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 PGRMC2O15173 223 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 UGDHO60701 494 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 HPNP05981 417 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 MTHFD2P13995 350 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 DRD2P14416 443 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 MAGEA4P43358 317 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 ZNF136P52737 540 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 NAB1Q13506 487 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 RCAN2Q14206 197 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 UAP1Q16222 522 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 NNATQ16517 81 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 MROH9Q5TGP6 573 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 TTC19Q6DKK2 380 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 VASNQ6EMK4 673 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 CAMKMTQ7Z624 323 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 CENPLQ8N0S6 344 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 OR4K14Q8NGD5 310 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 RHEBL1Q8TAI7 183 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 ABTB1Q969K4 478 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 SERPINI1Q99574 410 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 PRDM14Q9GZV8 571 aa11.88□□□□□ -0.51
SF3B3-202ENST00000562722 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
SF3B3-202ENST00000562722 ITPR3Q14573 2671 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 PRRC2AP48634 2157 aaKnown RBP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 SIX3O95343 332 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CLDN9O95484 217 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 RAF1P04049 648 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 C2P06681 752 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 KLK1P06870 262 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CT62P0C5K7 136 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 BMP7P18075 431 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CTSSP25774 331 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 OPRM1P35372 400 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CASP3P42574 277 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 XKP51811 444 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CCNG1P51959 295 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CAV1Q03135 178 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 ACAP2Q15057 778 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 PCBP2Q15366 365 aaKnown RBP eCLIP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 ANGPTL8Q6UXH0 198 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 YRDCQ86U90 279 aaKnown RBP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 SPATA4Q8NEY3 305 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 OR1J4Q8NGS1 313 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 CDK15Q96Q40 435 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 BRINP2Q9C0B6 783 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 VPS11Q9H270 941 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 UBQLN3Q9H347 655 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 GSX1Q9H4S2 264 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
SF3B3-202ENST00000562722 BCAP29Q9UHQ4 241 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 NCKAP5O14513 1909 aa11.87□□□□□ -0.51
SF3B3-202ENST00000562722 A0A096LPK6 155 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CD8B2A6NJW9 211 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 H0Y3Z8 333 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 FOXE1O00358 373 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CDH16O75309 829 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 ERN1O75460 977 aaKnown RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 SEMA3DO95025 777 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 TMIGD3P0DMS9 266 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 EPXP11678 715 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CYP4B1P13584 511 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CPMP14384 443 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 PORP16435 677 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 ABCD3P28288 659 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms