RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FAM180BQ6P0A1 224 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 QSOX2Q6ZRP7 698 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMPRSS11FQ6ZWK6 438 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 MOB3CQ70IA8 216 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 FAM122BQ7Z309 247 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 UNC93AQ86WB7 457 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PAQR7Q86WK9 346 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 MSRB3Q8IXL7 192 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 OR6V1Q8N148 313 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 FBXO39Q8N4B4 442 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZNF561Q8N587 486 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NKAPQ8N5F7 415 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 EID2Q8N6I1 236 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PXT1Q8NFP0 134 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 TCTEX1D2Q8WW35 142 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 FAM151AQ8WW52 585 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PMM1Q92871 262 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ZNF419Q96HQ0 510 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 C7orf34Q96L11 122 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GFM1Q96RP9 751 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 MTERF1Q99551 399 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 POLR2J2Q9GZM3 115 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 ABCG5Q9H222 651 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMPRSS5Q9H3S3 457 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 CLMPQ9H6B4 373 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 ALG9Q9H6U8 611 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 TMEM138Q9NPI0 162 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NIT2Q9NQR4 276 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 NANSQ9NR45 359 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 THSD1Q9NS62 852 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 RNF19AQ9NV58 838 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 GDE1Q9NZC3 331 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 AKAP7Q9P0M2 348 aaPredicted RBP6.9□□□□□ -1.3
CDH1-203ENST00000561751 MIOXQ9UGB7 285 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 OR12D3Q9UGF7 316 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 SLC6A14Q9UN76 642 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 CA5BQ9Y2D0 317 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 PPP2R3BQ9Y5P8 575 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 SLC22A7Q9Y694 548 aa6.9□□□□□ -1.3
CDH1-203ENST00000561751 LOC102723532A0A0G2JNH3 316 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 A0A1B0GUH1 482 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 C9orf170A2RU37 121 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 AGAP14A8MT82 685 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 G3V3Q6 166 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 BLOC1S5-TXNDC5H3BN57 136 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 I6L893 689 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 SLC31A2O15432 143 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 RGS14O43566 566 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 GSTZ1O43708 216 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 PRMT3O60678 531 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CSO75390 466 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 AP2A2O94973 939 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 GLP2RO95838 553 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CBX7O95931 251 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 SERPINA3P01011 423 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 VIPP01282 170 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 IFNA2P01563 188 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 HIST1H2ABP04908 130 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 FHP07954 510 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 UBBP0CG47 229 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 UBCP0CG48 685 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 IFNGR1P15260 489 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 GNSP15586 552 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 OGNP20774 298 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 EPHA2P29317 976 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 GABRA5P31644 462 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 GPX4P36969 197 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 CEACAM6P40199 344 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ADH7P40394 386 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 MNDAP41218 407 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CASP2P42575 452 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 SLC1A3P43003 542 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 FOXA1P55317 472 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ACTR1AP61163 376 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 RPS27AP62979 156 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 UBA52P62987 128 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 MC2RQ01718 297 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 TCP10Q12799 353 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ILF3Q12906 894 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH1-203ENST00000561751 SNTB1Q13884 538 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 IL18Q14116 193 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 HNF4GQ14541 408 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ZNF460Q14592 562 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 PCBP2Q15366 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH1-203ENST00000561751 SGCAQ16586 387 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms