RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ALBP02768 609 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 HMGN2P05204 90 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 C8BP07358 591 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 CD63P08962 238 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 JMJD7P0C870 316 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ETFAP13804 333 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 NCK1P16333 377 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 SLC7A1P30825 629 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 PCGF2P35227 344 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 SOX11P35716 441 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 MC3RP41968 323 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 STT3AP46977 705 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 MVDP53602 400 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 LIMK1P53667 647 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 BTG2P78543 158 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 CDK6Q00534 326 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 DUSP2Q05923 314 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 EIF3IQ13347 325 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 ADRM1Q16186 407 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ISXQ2M1V0 245 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 PRICKLE4Q2TBC4 344 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 MINDY4Q4G0A6 757 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 FAM98BQ52LJ0 330 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 COX20Q5RI15 118 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ATAD3BQ5T9A4 648 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 CDCP2Q5VXM1 449 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 REEP3Q6NUK4 255 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 QSOX2Q6ZRP7 698 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 RAB11FIP2Q7L804 512 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 OVCH1Q7RTY7 1134 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 OR2L13Q8N349 312 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ENDOVQ8N8Q3 282 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 MIPOL1Q8TD10 442 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ADAMTS15Q8TE58 950 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 XAGE5Q8WWM1 108 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 PYDC1Q8WXC3 89 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 DUS3LQ96G46 650 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 LIN37Q96GY3 246 aaPredicted RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 LRFN5Q96NI6 719 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 MS4A4EQ96PG1 132 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 TAAR9Q96RI9 348 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ACTRT3Q9BYD9 372 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 CHST8Q9H2A9 424 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 YY1AP1Q9H869 796 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 A4GALTQ9NPC4 353 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 EXD2Q9NVH0 621 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 C14orf105Q9NVL8 296 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 GPATCH2Q9NW75 528 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 IFT80Q9P2H3 777 aaPredicted RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 GMPR2Q9P2T1 348 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 GPN3Q9UHW5 284 aaPredicted RBP9.65□□□□□ -0.86
USP3-219ENST00000561326 ANAPC2Q9UJX6 822 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 RPS6KA6Q9UK32 745 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ACSL6Q9UKU0 697 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 USP22Q9UPT9 525 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 LIPT1Q9Y234 373 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 ANGPT4Q9Y264 503 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 AP4S1Q9Y587 144 aa9.65□□□□□ -0.86
USP3-219ENST00000561326 IGLV3-12A0A075B6K2 115 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 CCDC187A0A096LP49 1063 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 A0A1W2PS29 197 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 DHRS12A0PJE2 317 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 H0Y3Z8 333 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 MEN1O00255 615 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 HNRNPRO43390 633 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 ASNA1O43681 348 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 CSO75390 466 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 PDE9AO76083 593 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 CYC1P08574 325 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 ARAFP10398 606 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 NR2F1P10589 423 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 CCL4P13236 92 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 ATP6V1B2P21281 511 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 MAOAP21397 527 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 KDELR2P33947 212 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 RORAP35398 523 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 ERFP50548 548 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 CASP9P55211 416 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 MRPS22P82650 360 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 CHRNB3Q05901 458 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 COL9A2Q14055 689 aaPredicted RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 SCARB2Q14108 478 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 ELOAQ14241 798 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 LASP1Q14847 261 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 RCN1Q15293 331 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 LTB4RQ15722 352 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 NSDHLQ15738 373 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 TRMT12Q53H54 448 aaKnown RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 ZNF628Q5EBL2 1059 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 IRAK1BP1Q5VVH5 260 aa9.64□□□□□ -0.87
USP3-219ENST00000561326 TNFAIP8L2Q6P589 184 aaPredicted RBP9.64□□□□□ -0.87
USP3-219ENST00000561326 FAM111BQ6SJ93 734 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms