RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GLRA3O75311 464 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 GUCY1B2O75343 617 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 ATP6AP2O75787 350 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 HSD3B1P14060 373 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 PORP16435 677 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 HSD3B2P26439 372 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 FEN1P39748 380 aaKnown RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 CSTF3Q12996 717 aaKnown RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 NNATQ16517 81 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 NTRK2Q16620 822 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 HLA-DQA1Q5Y7H0 255 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 MCEMP1Q8IX19 187 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 DND1Q8IYX4 353 aaKnown RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 TAGAPQ8N103 731 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 VWA5B2Q8N398 1253 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 ZNF615Q8N8J6 731 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 METTL6Q8TCB7 284 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 BRINP2Q9C0B6 783 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 OR10A5Q9H207 317 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 GSTO2Q9H4Y5 243 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 ZNF703Q9H7S9 590 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 PROK2Q9HC23 129 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 CHST11Q9NPF2 352 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 PNPLA3Q9NST1 481 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 NMRK1Q9NWW6 199 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 VPS29Q9UBQ0 182 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 CNOT11Q9UKZ1 510 aaKnown RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 DTX4Q9Y2E6 619 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 TIMM22Q9Y584 194 aa15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 NUP214P35658 2090 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-208ENST00000561271 GOLGA6L10A6NI86 522 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 PCDH7O60245 1069 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 ESRRBO95718 433 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 IGHG3P01860 377 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 RFPL3SP0C7P2 107 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 COX6B1P14854 86 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 GPX3P22352 226 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 SERPINB3P29508 390 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 DEKP35659 375 aaKnown RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 FBXW4P57775 412 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 RAE1P78406 368 aaKnown RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 HMGCS1Q01581 520 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 EXOSC7Q15024 291 aaKnown RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 RPS6KA2Q15349 733 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 LTB4RQ15722 352 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 HYAL4Q2M3T9 481 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 BICRALQ6AI39 1079 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 FAM111BQ6SJ93 734 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 TRILQ7L0X0 811 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 PRR22Q8IZ63 422 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 CCNYL1Q8N7R7 359 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 SIMC1Q8NDZ2 872 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 ADCY4Q8NFM4 1077 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 OR5M9Q8NGP3 310 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 EPS8L3Q8TE67 593 aaKnown RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 JSRP1Q96MG2 331 aaPredicted RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 FAIM2Q9BWQ8 316 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 MAT2BQ9NZL9 334 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 HEY2Q9UBP5 337 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 MCM8Q9UJA3 840 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 BOKQ9UMX3 212 aaPredicted RBP15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 STK38LQ9Y2H1 464 aa15.82■□□□□ 0.12
CDC42BPB-208ENST00000561271 TACC2O95359 2948 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 G3V2L1 256 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ULK1O75385 1050 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 PROCP04070 461 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ATP1B1P05026 303 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ENO1P06733 434 aaKnown RBP15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 IL3P08700 152 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 MYL2P10916 166 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 CSNK2A2P19784 350 aaPredicted RBP15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 S1PR1P21453 382 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 PKNOX1P55347 436 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 DUSP8Q13202 625 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 PRICKLE4Q2TBC4 344 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 SCIMPQ6UWF3 145 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ZYG11AQ6WRX3 759 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 CHTF18Q8WVB6 975 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 DIO2Q92813 273 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ADIPOR1Q96A54 375 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 CNRIP1Q96F85 164 aaPredicted RBP15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 APIPQ96GX9 242 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 CSMD1Q96PZ7 3565 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 DOHHQ9BU89 302 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 EBPLQ9BY08 206 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 ITPAQ9BY32 194 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 MID1IP1Q9NPA3 183 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 COQ3Q9NZJ6 369 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 CNIH4Q9P003 139 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 DCDC2Q9UHG0 476 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 BCAP29Q9UHQ4 241 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 PDZD2O15018 2839 aa15.81■□□□□ 0.12
CDC42BPB-208ENST00000561271 GNG14A0A1W2PPG7 69 aa15.8■□□□□ 0.12
CDC42BPB-208ENST00000561271 AQP7O14520 342 aa15.8■□□□□ 0.12
CDC42BPB-208ENST00000561271 UBFD1O14562 309 aaKnown RBP15.8■□□□□ 0.12
CDC42BPB-208ENST00000561271 KRT15P19012 456 aa15.8■□□□□ 0.12
CDC42BPB-208ENST00000561271 ENDOUP21128 410 aaKnown RBP15.8■□□□□ 0.12
CDC42BPB-208ENST00000561271 TNFRSF8P28908 595 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms