RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	RELL2	Q8NC24	303 aa	Predicted RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	NAXE	Q8NCW5	288 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	TNIP2	Q8NFZ5	429 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	OR4K14	Q8NGD5	310 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	TRPC4AP	Q8TEL6	797 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	GNRHR2	Q96P88	292 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	GAL3ST4	Q96RP7	486 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	SERPINI1	Q99574	410 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	POLDIP3	Q9BY77	421 aa	Known RBP	12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	OR10A5	Q9H207	317 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	CRIM1	Q9NZV1	1036 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	ADAM29	Q9UKF5	820 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	CES1P1	Q9UKY3	287 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	MED12L	Q86YW9	2145 aa		12.5	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF469	Q96JG9	3925 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754		A0A096LPK6	155 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754		A0A1W2PS29	197 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	KDM4E	B2RXH2	506 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	DVL2	O14641	736 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	SIX3	O95343	332 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	GBA	P04062	536 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	ABCB1	P08183	1280 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	CT62	P0C5K7	136 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	CD99	P14209	185 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	XK	P51811	444 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	C2orf54	Q08AI8	447 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	MGAT2	Q10469	447 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	MAP4K2	Q12851	820 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	SNTB1	Q13884	538 aa	Known RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	4e-17	■■■■■ 27.1
RNF31-223	ENST00000560754	ACSF3	Q4G176	576 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	C10orf62	Q5T681	223 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	NSUN5P2	Q63ZY6	315 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	OR52E8	Q6IFG1	317 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	TMEM81	Q6P7N7	255 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	PACS2	Q86VP3	889 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	TGIF2LY	Q8IUE0	185 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	LACC1	Q8IV20	430 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	PLD6	Q8N2A8	252 aa	Known RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	LIX1	Q8N485	282 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	OR7G1	Q8NGA0	311 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	FAM222B	Q8WU58	562 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	RNASE6	Q93091	150 aa	Known RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF597	Q96LX8	424 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	JSRP1	Q96MG2	331 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	RILP	Q96NA2	401 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	NOL11	Q9H8H0	719 aa	Known RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	PRM3	Q9NNZ6	103 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	TEX10	Q9NXF1	929 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	ST6GALNAC2	Q9UJ37	374 aa		12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF31-223	ENST00000560754	CD8B2	A6NJW9	211 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	TRAPPC6A	O75865	159 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	LRAT	O95237	230 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	IL2RA	P01589	272 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	CPM	P14384	443 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	POR	P16435	677 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	BMP7	P18075	431 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	GDF1	P27539	372 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	TYK2	P29597	1187 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	SOX18	P35713	384 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	ASCL1	P50553	236 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF136	P52737	540 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	TECRL	Q5HYJ1	363 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	HLA-DQA1	Q5Y7H0	255 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	FRG2	Q64ET8	278 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	BICRAL	Q6AI39	1079 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	TIGD3	Q6B0B8	471 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	NUP54	Q7Z3B4	507 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	GALNT12	Q8IXK2	581 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	PM20D2	Q8IYS1	436 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	OR52B6	Q8NGF0	335 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	WDYHV1	Q96HA8	205 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	TMEM41A	Q96HV5	264 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	FRG2B	Q96QU4	278 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	FUT8	Q9BYC5	575 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	CALHM2	Q9HA72	323 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	ZBTB26	Q9HCK0	441 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	ZDHHC18	Q9NUE0	388 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	AHSP	Q9NZD4	102 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	JKAMP	Q9P055	326 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	ZNF639	Q9UID6	485 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	C15orf41	Q9Y2V0	281 aa		12.48	□□□□□ -0.41
RNF31-223	ENST00000560754	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754		A6NNC1	897 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	STX16-NPEPL1	H3BU86	382 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	STX16	O14662	325 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	CDH16	O75309	829 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	KRT38	O76015	456 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	KLK1	P06870	262 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	RBP1	P09455	135 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	BMP5	P22003	454 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	ABCD3	P28288	659 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	UQCRC1	P31930	480 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	TMED10	P49755	219 aa	Known RBP	12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	NRG3	P56975	720 aa		12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	RPP38	P78345	283 aa	Known RBP	12.47	□□□□□ -0.41
RNF31-223	ENST00000560754	PRICKLE4	Q2TBC4	344 aa		12.47	□□□□□ -0.41

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