RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ESRRBO95718 433 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ATP1B1P05026 303 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ECHS1P30084 290 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 MASP1P48740 699 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 FOXO1Q12778 655 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 LCP2Q13094 533 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 GXYLT1Q4G148 440 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 SGO1Q5FBB7 561 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 SLC48A1Q6P1K1 146 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ZNF585AQ6P3V2 769 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 EIF1ADQ8N9N8 165 aaKnown RBP12.97□□□□□ -0.33
TPM1-223ENST00000560445 DIO2Q92813 273 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 SH2D2AQ9NP31 389 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 ZNF358Q9NW07 568 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
TPM1-223ENST00000560445 DCDC2Q9UHG0 476 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
TPM1-223ENST00000560445 LRBAP50851 2863 aa12.97□□□□□ -0.33
TPM1-223ENST00000560445 PHF3Q92576 2039 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 A0A0G2JMM0 328 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 A0A1W2PPB8 328 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 A0A1W2PRS3 328 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 PINLYPA6NC86 204 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 KIR3DP1A8MWS1 328 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 RIPK2O43353 540 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 PRKRAO75569 313 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 GBAP04062 536 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 RHOXF2BP0C7M4 288 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 DRD2P14416 443 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 PIGAP37287 484 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 HEPACAMQ14CZ8 416 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 C1orf185Q5T7R7 199 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 LETMD1Q6P1Q0 360 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 PM20D2Q8IYS1 436 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 METTL6Q8TCB7 284 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 KLHL29Q96CT2 875 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 HSPBAP1Q96EW2 488 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 NSUN5Q96P11 429 aaKnown RBP12.96□□□□□ -0.33
TPM1-223ENST00000560445 RHOXF2Q9BQY4 288 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 TRIM8Q9BZR9 551 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 ENKD1Q9H0I2 346 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 MCM8Q9UJA3 840 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 RNF6Q9Y252 685 aa12.96□□□□□ -0.33
TPM1-223ENST00000560445 APCP25054 2843 aa12.96□□□□□ -0.34
TPM1-223ENST00000560445 GNG14A0A1W2PPG7 69 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 HRKO00198 91 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PGRMC2O15173 223 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 ERAL1O75616 437 aaKnown RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 SLITRK5O94991 958 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PDYNP01213 254 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 SNRPB2P08579 225 aaKnown RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 PRF1P14222 555 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 IMPDH1P20839 514 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 GDF1P27539 372 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 SSTR4P31391 388 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 HSD17B3P37058 310 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PRKAA2P54646 552 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 CDH13P55290 713 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 MRPS22P82650 360 aaKnown RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 ACSM2AQ08AH3 577 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PMPCAQ10713 525 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 MAP4K2Q12851 820 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 SNTA1Q13424 505 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 ERCC6LQ2NKX8 1250 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 ZNF678Q5SXM1 525 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 UBAP2Q5T6F2 1119 aaKnown RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 PRAMEF20Q5VT98 475 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 ACSM2BQ68CK6 577 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 SCIMPQ6UWF3 145 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 LYPD8Q6UX82 237 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 CDYL2Q8N8U2 506 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 ZNF441Q8N8Z8 693 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM1-223ENST00000560445 L3HYPDHQ96EM0 354 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 JSRP1Q96MG2 331 aaPredicted RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 BRINP2Q9C0B6 783 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 METTL7AQ9H8H3 244 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PFDN4Q9NQP4 134 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 PNPLA3Q9NST1 481 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 BCAP29Q9UHQ4 241 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
TPM1-223ENST00000560445 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
TPM1-223ENST00000560445 HSPB2A8KAH6 182 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 AHRRA9YTQ3 701 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 MANBAO00462 879 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 GLRA3O75311 464 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 KRT20P35900 424 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 ZFP36L2P47974 494 aaKnown RBP12.94□□□□□ -0.34
TPM1-223ENST00000560445 ALDH9A1P49189 494 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 NUP107P57740 925 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 HSPB2Q16082 182 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms