RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 TGDSO95455 350 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 CLPSP04118 112 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 CT62P0C5K7 136 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 FRKP42685 505 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-208ENST00000560427 HLCSP50747 726 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 SSR4P51571 173 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 NCBP2P52298 156 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD8-208ENST00000560427 MGAT2Q10469 447 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 PTGR1Q14914 329 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 ZNF750Q32MQ0 723 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 OPN5Q6U736 354 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 CAMKMTQ7Z624 323 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 CCDC116Q8IYX3 515 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 AMER2Q8N7J2 671 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 ZNF615Q8N8J6 731 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 OR9A2Q8NGT5 310 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 TP53INP1Q96A56 240 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 ZBED6CLQ96FA7 236 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-208ENST00000560427 PPP1R36Q96LQ0 422 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 RASL10BQ96S79 203 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 WWTR1Q9GZV5 400 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD8-208ENST00000560427 OR10A5Q9H207 317 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 ACSS1Q9NUB1 689 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-208ENST00000560427 PLA2G3Q9NZ20 509 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 BAIAP2L1Q9UHR4 511 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 BSNQ9UPA5 3926 aa12.06□□□□□ -0.48
NEDD8-208ENST00000560427 A0A087WV62 115 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 C2orf92A0A1B0GVN3 265 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 PLOD2O00469 737 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 COQ9O75208 318 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 OR2J2O76002 312 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 LRATO95237 230 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 KITP10721 976 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 G6PDP11413 515 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 CD46P15529 392 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 S1PR1P21453 382 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 SSTR4P31391 388 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 CLDN8P56748 225 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 DCAF7P61962 342 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 OC90Q02509 493 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-208ENST00000560427 DUSP2Q05923 314 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 MLC1Q15049 377 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 OR1C1Q15619 314 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 DPY19L1Q2PZI1 675 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 HLA-DQA1Q5Y7H0 255 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 RIMKLAQ8IXN7 391 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 TAGAPQ8N103 731 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 TMEM156Q8N614 296 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 ZNF441Q8N8Z8 693 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 Q8NA96 180 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 TMEM178AQ8NBL3 297 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 CLHC1Q8NHS4 586 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 ACTRT2Q8TDY3 377 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-208ENST00000560427 STON2Q8WXE9 905 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 ASB15Q8WXK1 588 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
NEDD8-208ENST00000560427 SGCZQ96LD1 299 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 C5orf34Q96MH7 638 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 AMDHD1Q96NU7 426 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 GAL3ST4Q96RP7 486 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 SH3BP4Q9P0V3 963 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 LRFN1Q9P244 771 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
NEDD8-208ENST00000560427 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 A8MVJ9 347 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 WWP2O00308 870 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 DYNC1I1O14576 645 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 ACOX3O15254 700 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 AKAP10O43572 662 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 SLC25A12O75746 678 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 NEURL1O76050 574 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CBX7O95931 251 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 EPHA3P29320 983 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 SOX18P35713 384 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CD96P40200 585 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 TMED10P49755 219 aaKnown RBP12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CLNS1AP54105 237 aaKnown RBP12.04□□□□□ -0.48
NEDD8-208ENST00000560427 DIO3P55073 304 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 LTB4RQ15722 352 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 PLEKHN1Q494U1 663 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-208ENST00000560427 TRMT12Q53H54 448 aaKnown RBP12.04□□□□□ -0.48
NEDD8-208ENST00000560427 PIGGQ5H8A4 983 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CPTPQ5TA50 214 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 FAM180BQ6P0A1 224 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 FAM111BQ6SJ93 734 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 PRICKLE2Q7Z3G6 844 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CYP4Z2PQ8N1L4 340 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 OR2L13Q8N349 312 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 GOLM1Q8NBJ4 401 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CATSPER1Q8NEC5 780 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 ADCY4Q8NFM4 1077 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 OR52R1Q8NGF1 315 aa12.04□□□□□ -0.48
NEDD8-208ENST00000560427 CEP70Q8NHQ1 597 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms