RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.6□□□□□ -1.03
SMAD3-215ENST00000560424 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 HEATR5BQ9P2D3 2071 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ATP6AP2A0A1C7CYW4 349 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PABPN1LA6NDY0 278 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TRIM64A6NGJ6 449 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF860A6NHJ4 632 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TRIM64BA6NI03 449 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 A8MUA0 341 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 H7BY64 318 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 K7EPI3 171 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 MYO1CO00159 1063 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 CASKO14936 926 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TAPBPO15533 448 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 SUSD5O60279 629 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 UGDHO60701 494 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 CCDC22O60826 627 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 B4GALT2O60909 372 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 STK16O75716 305 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ATP6AP2O75787 350 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 OTCP00480 354 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 IL2RAP01589 272 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 IGHG3P01860 377 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 SERPINA6P08185 405 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 SLC35G6P0C7Q6 338 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 GRK3P35626 688 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 MAGEA5P43359 124 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PNLIPRP1P54315 467 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 SLC10A1Q14973 349 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 HERC3Q15034 1050 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TBCCQ15814 346 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 UGT3A2Q3SY77 523 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 FBXL19-AS1Q494R0 122 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 GALNTL6Q49A17 601 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 GGTA1PQ4G0N0 100 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 KANK2Q63ZY3 851 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 IL20RBQ6UXL0 311 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 CXorf67Q86X51 503 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 GPALPP1Q8IXQ4 340 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 FBXW8Q8N3Y1 598 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 FITM2Q8N6M3 262 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 RELL2Q8NC24 303 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PPFIBP2Q8ND30 876 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ACTRT2Q8TDY3 377 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PERPQ96FX8 193 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PRAP1Q96NZ9 151 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 CCL19Q99731 98 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PIP5K1AQ99755 562 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 MACROD1Q9BQ69 325 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TMEM79Q9BSE2 394 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 MEAF6Q9HAF1 191 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ZBTB26Q9HCK0 441 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 PNPOQ9NVS9 261 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 MARCOQ9UEW3 520 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 YARS2Q9Y2Z4 477 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TRAF6Q9Y4K3 522 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 CHD3Q12873 2000 aaKnown RBP8.59□□□□□ -1.03
SMAD3-215ENST00000560424 SCN3AQ9NY46 2000 aa8.59□□□□□ -1.03
SMAD3-215ENST00000560424 TRGV5A0A0B4J1U4 118 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 A0A1B0GVC2 190 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 FEZF1A0PJY2 475 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 PINLYPA6NC86 204 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 NCF1BA6NI72 391 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 NCF1CA8MVU1 366 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 EEF1E1-BLOC1S5C9J1V9 151 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 G3V3Y1 287 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 PSMD12O00232 456 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 AZIN1O14977 448 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 SLC22A2O15244 555 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 EEF1E1O43324 174 aaKnown RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 HRGP04196 525 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 ENO1P06733 434 aaKnown RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 UROSP10746 265 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 ERGP11308 486 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 NCF1P14598 390 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 HRH2P25021 359 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 IDH3AP50213 366 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 SORDQ00796 357 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 HYAL2Q12891 473 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 IFT88Q13099 833 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 NIPAL1Q6NVV3 410 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 CLNKQ7Z7G1 428 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 ASPGQ86U10 573 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 SHISA5Q8N114 240 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 LIX1Q8N485 282 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 TMEM251Q8N6I4 163 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 OR5T3Q8NGG3 340 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 OR56A3Q8NH54 315 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 TRPC4APQ8TEL6 797 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 SLC13A3Q8WWT9 602 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 EXT2Q93063 718 aa8.58□□□□□ -1.04
SMAD3-215ENST00000560424 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
SMAD3-215ENST00000560424 EGFL8Q99944 293 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms