RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CHRNGP07510 517 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ANXA4P09525 319 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 CSNK2A2P19784 350 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 CNR1P21554 472 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 PIGAP37287 484 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 PPIAP62937 165 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TRA2BP62995 288 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 MRPS35P82673 323 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 FOXO1Q12778 655 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TRMT12Q53H54 448 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SPIN4Q56A73 249 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 GALNT18Q6P9A2 607 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 NCCRP1Q6ZVX7 275 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 MAMDC2Q7Z304 686 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TRIM46Q7Z4K8 759 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SPPL2CQ8IUH8 684 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 PRR22Q8IZ63 422 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 VWA5B2Q8N398 1253 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 MREGQ8N565 214 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 GOLM1Q8NBJ4 401 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 FAM13CQ8NE31 585 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 OR10G3Q8NGC4 313 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 OR5M3Q8NGP4 307 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SLC22A8Q8TCC7 542 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TCP10LQ8TDR4 215 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ADIPOR1Q96A54 375 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 EXOSC8Q96B26 276 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SPACA9Q96E40 222 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SGCZQ96LD1 299 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 FAIM2Q9BWQ8 316 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ROPN1BQ9BZX4 212 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 BRINP2Q9C0B6 783 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 IQCGQ9H095 443 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 DEFB127Q9H1M4 99 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 OR10A5Q9H207 317 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TUBB1Q9H4B7 451 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ANKRA2Q9H9E1 313 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ROPN1Q9HAT0 212 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 PROK2Q9HC23 129 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 SH2D2AQ9NP31 389 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 TUBA8Q9NY65 449 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF639Q9UID6 485 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 UTS2RQ9UKP6 389 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 RAB21Q9UL25 225 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 FIS1Q9Y3D6 152 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 CCL27Q9Y4X3 112 aa10.74□□□□□ -0.69
RABGGTA-216ENST00000560243 FREM3P0C091 2139 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 A0A1B0GTH9 108 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 TMEM233B4DJY2 109 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CDC40O60508 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 GLSO94925 669 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CBX7O95931 251 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CELA3AP09093 270 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 FBXO45P0C2W1 286 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 UROSP10746 265 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 DRD2P14416 443 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 PCSK2P16519 638 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 GPX3P22352 226 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 ARRB2P32121 409 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 PER3P56645 1201 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 PLGLB1Q02325 96 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 RBPJQ06330 500 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 MAP4K2Q12851 820 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 NNATQ16517 81 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 IMPG1Q17R60 797 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 C3P1Q6ZMU1 363 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 Q6ZPB1 254 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 ZCCHC23Q6ZST2 131 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CCDC116Q8IYX3 515 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 GHDCQ8N2G8 530 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 LRRC25Q8N386 305 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 SLC15A4Q8N697 577 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 OR2T11Q8NH01 316 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CDC26Q8NHZ8 85 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CTHRC1Q96CG8 243 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CCDC120Q96HB5 630 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 FAM173AQ9BQD7 235 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 TTTY12Q9BZ98 90 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 NXF5Q9H1B4 397 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 SACM1LQ9NTJ5 587 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 SIRT5Q9NXA8 310 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 BCAP29Q9UHQ4 241 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 MID2Q9UJV3 735 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 PSME2Q9UL46 239 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 EXO1Q9UQ84 846 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 POLR3HQ9Y535 204 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 HRH3Q9Y5N1 445 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 LIPGQ9Y5X9 500 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 CHCHD2Q9Y6H1 151 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 ZNF780BQ9Y6R6 833 aa10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-216ENST00000560243 H3BQF6 201 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 AZIN1O14977 448 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 TYROBPO43914 113 aa10.72□□□□□ -0.69
RABGGTA-216ENST00000560243 P04436 131 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms