RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 A0A1W2PR48 441 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 LRRTM2O43300 516 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ERI3O43414 337 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 KAT7O95251 611 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 OXSR1O95747 527 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 HBQ1P09105 142 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PIPP12273 146 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 FCARP24071 287 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RAB8AP61006 207 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 UBE3AQ05086 875 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PRKCDQ05655 676 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PRDX1Q06830 199 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PDGFRLQ15198 375 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CST6Q15828 149 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 C18orf63Q68DL7 685 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ACSM5Q6NUN0 579 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TUBA3EQ6PEY2 450 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PSRC1Q6PGN9 363 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TMEM107Q6UX40 140 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 VITQ6UXI7 678 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SPATC1Q76KD6 591 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NATD1Q8N6N6 113 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 OR4K5Q8NGD3 323 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RAB7BQ96AH8 199 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TRMT61BQ9BVS5 477 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 FNDC11Q9BVV2 318 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PLA2G12AQ9BZM1 189 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PLA2G2FQ9BZM2 168 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NUAK2Q9H093 628 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ACSS1Q9NUB1 689 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 C14orf119Q9NWQ9 140 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 WBP11Q9Y2W2 641 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PCDHGB6Q9Y5F9 930 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 STON1Q9Y6Q2 735 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CKAP5Q14008 2032 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TRPM6Q9BX84 2022 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TMEM221A6NGB7 291 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 MAN2B1O00754 1011 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NARSO43776 548 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CLEC3AO75596 197 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SCG5P05408 212 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CERS1P27544 350 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PKLRP30613 574 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RPS19P39019 145 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TPTEP56180 551 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 KRT33BQ14525 404 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 GINS1Q14691 196 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TMEM201Q5SNT2 666 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 MFSD4BQ5TF39 518 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 OR52E1Q8NGJ3 308 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SUN3Q8TAQ9 357 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CNRIP1Q96F85 164 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TRNT1Q96Q11 434 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ASPNQ9BXN1 380 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 BARHL1Q9BZE3 327 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SLC6A17Q9H1V8 727 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 EGLN3Q9H6Z9 239 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ERVK13-1Q9NX77 482 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SPHK1Q9NYA1 384 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ADAM29Q9UKF5 820 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CARD8Q9Y2G2 431 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PEX16Q9Y5Y5 336 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 A3GALT2U3KPV4 340 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NUMA1Q14980 2115 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PNMA8CA0A1B0GUJ8 204 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ISPDA4D126 451 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SAGE2PA6NJ88 616 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 A8MU76 341 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PDZK1P1A8MUH7 402 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CYP7B1O75881 506 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 AIFM1O95831 613 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 HMGN2P05204 90 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 PEBP1P30086 187 aaKnown RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 NTSP30990 170 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SOX6P35712 828 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RAB28P51157 221 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SEC13P55735 322 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RHAGQ02094 409 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF45Q02386 682 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CDC20Q12834 499 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 MAP4K2Q12851 820 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SPHARQ15513 63 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 GPAT3Q53EU6 434 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TOR1AIP1Q5JTV8 583 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 FAM109BQ6ICB4 259 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-216ENST00000559819 CCDC190Q86UF4 302 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 KIF18BQ86Y91 864 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 TMEM145Q8NBT3 493 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 ZG16BQ96DA0 208 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 MS4A6EQ96DS6 147 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 RERGLQ9H628 205 aa9.47□□□□□ -0.89
LRRC28-216ENST00000559819 SP140LQ9H930 580 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms