RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MARVELD2Q8N4S9 558 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 CDYL2Q8N8U2 506 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 C17orf47Q8NEP4 570 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 OR5M9Q8NGP3 310 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 METTL6Q8TCB7 284 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 DIO2Q92813 273 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 TM4SF18Q96CE8 201 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
TPM1-218ENST00000559281 JSRP1Q96MG2 331 aaPredicted RBP16.34■□□□□ 0.21
TPM1-218ENST00000559281 ZNF382Q96SR6 550 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 SECISBP2Q96T21 854 aaKnown RBP16.34■□□□□ 0.21
TPM1-218ENST00000559281 RHOXF2Q9BQY4 288 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 ACKR4Q9NPB9 350 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 KCNJ16Q9NPI9 418 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 PSMC3IPQ9P2W1 217 aaPredicted RBP16.34■□□□□ 0.21
TPM1-218ENST00000559281 DCDC2Q9UHG0 476 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 RNF6Q9Y252 685 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 ZNF780BQ9Y6R6 833 aa16.34■□□□□ 0.21
TPM1-218ENST00000559281 A0A1B0GTL3 188 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 MANBAO00462 879 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 DLX3O60479 287 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 WDR1O75083 606 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 ERAL1O75616 437 aaKnown RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 SNX4O95219 450 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 CLPSP04118 112 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 KRT15P19012 456 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 HMOX2P30519 316 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 PRKAA2P54646 552 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 MAP4K2Q12851 820 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 CSTF3Q12996 717 aaKnown RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 RPS6KA2Q15349 733 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 B3GNT6Q6ZMB0 384 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 VWA5B2Q8N398 1253 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 LIX1Q8N485 282 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 C1orf52Q8N6N3 182 aaKnown RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 GBP7Q8N8V2 638 aaPredicted RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 OR10Q1Q8NGQ4 319 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 CHTF18Q8WVB6 975 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 BRINP2Q9C0B6 783 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 ENKD1Q9H0I2 346 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 ZNF225Q9UK10 706 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 CES1P1Q9UKY3 287 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.2
TPM1-218ENST00000559281 LIPGQ9Y5X9 500 aa16.33■□□□□ 0.2
TPM1-218ENST00000559281 A0A1W2PS29 197 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 CDH16O75309 829 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 ESRRBO95718 433 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 ATP1B1P05026 303 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 CELA3AP09093 270 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 CT62P0C5K7 136 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 GABRA1P14867 456 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 FEN1P39748 380 aaKnown RBP16.32■□□□□ 0.2
TPM1-218ENST00000559281 ALDH9A1P49189 494 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 PKNOX1P55347 436 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 NUP107P57740 925 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 SAMD14Q8IZD0 417 aaPredicted RBP16.32■□□□□ 0.2
TPM1-218ENST00000559281 ADIPOR1Q96A54 375 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 KLHL29Q96CT2 875 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 CCDC126Q96EE4 140 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 TMEM237Q96Q45 408 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 TTYH2Q9BSA4 534 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 TRIM8Q9BZR9 551 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 ZNF703Q9H7S9 590 aaPredicted RBP16.32■□□□□ 0.2
TPM1-218ENST00000559281 PROK2Q9HC23 129 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 ALKBH4Q9NXW9 302 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 MCM8Q9UJA3 840 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 PCDHGB3Q9Y5G1 929 aa16.32■□□□□ 0.2
TPM1-218ENST00000559281 FOXO6A8MYZ6 492 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 GOLGA8RI6L899 631 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 ENO1P06733 434 aaKnown RBP16.31■□□□□ 0.2
TPM1-218ENST00000559281 FAM153BP0C7A2 387 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 RFPL3SP0C7P2 107 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 PYGBP11216 843 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 DRD2P14416 443 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 NAGAP17050 411 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 FBXW4P57775 412 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 NAA20P61599 178 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 LCP2Q13094 533 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 PRICKLE4Q2TBC4 344 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 FAM153CQ494X1 144 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 MEX3BQ6ZN04 569 aaKnown RBP16.31■□□□□ 0.2
TPM1-218ENST00000559281 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
TPM1-218ENST00000559281 NEIL3Q8TAT5 605 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 SPPL2AQ8TCT8 520 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 L3HYPDHQ96EM0 354 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 C14orf79Q96F83 325 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 HBEGFQ99075 208 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 PRODH2Q9UF12 536 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 PKDREJQ9NTG1 2253 aa16.31■□□□□ 0.2
TPM1-218ENST00000559281 NCOA6Q14686 2063 aaPredicted RBP16.31■□□□□ 0.2
TPM1-218ENST00000559281 ABCA12Q86UK0 2595 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms