RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 ZNF45Q02386 682 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 CSTF1Q05048 431 aaKnown RBP11.52□□□□□ -0.56
SEC11A-206ENST00000558924 INSL4Q14641 139 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 SPHARQ15513 63 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 IRAK1BP1Q5VVH5 260 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 IL20RBQ6UXL0 311 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 RASSF5Q8WWW0 418 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 C12orf66Q96MD2 445 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 SLC6A17Q9H1V8 727 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 TMEM245Q9H330 911 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 PSORS1C1Q9UIG5 152 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 PCDHB11Q9Y5F2 797 aa11.52□□□□□ -0.56
SEC11A-206ENST00000558924 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 NR2F1P10589 423 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 ZNF8P17098 575 aaPredicted RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 CSTF2P33240 577 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 TIE1P35590 1138 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 PRAMEF14Q5SWL7 426 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 PRAMEF13Q5VWM6 474 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 PTOV1Q86YD1 416 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 TRBV4-1A0A0J9YWV2 114 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 CPSF4LA6NMK7 179 aaKnown RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 SCAMP2O15127 329 aaKnown RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 CELP19835 753 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 TIA1P31483 386 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 NRIP1P48552 1158 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 XKP51811 444 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 OLR1P78380 273 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 LRRC32Q14392 662 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 GRM7Q14831 915 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 KLHL12Q53G59 568 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 ESCO2Q56NI9 601 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 KCTD20Q7Z5Y7 419 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 AMZ2Q86W34 360 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 KRT73Q86Y46 540 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 C7orf61Q8IZ16 206 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 OR5D16Q8NGK9 328 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 OR14C36Q8NHC7 312 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 ZFP3Q96NJ6 502 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 ZCCHC2Q9C0B9 1178 aaKnown RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 QRSL1Q9H0R6 528 aaKnown RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 NMNAT1Q9HAN9 279 aaPredicted RBP11.52□□□□□ -0.57
SEC11A-206ENST00000558924 RDH14Q9HBH5 336 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 GLTPQ9NZD2 209 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
SEC11A-206ENST00000558924 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CD8B2A6NJW9 211 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 M0R3H8 397 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 BTN3A3O00478 584 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CXCL10P02778 98 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 PDGFAP04085 211 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 SLC35G4P0C7Q5 338 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CD8BP10966 210 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 ITGAMP11215 1152 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 GGT2P36268 569 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 AVPR1BP47901 424 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 MAN2A2P49641 1150 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 KEAP1Q14145 624 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 DCST1Q5T197 706 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 TMEM145Q8NBT3 493 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 GALNT11Q8NCW6 608 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CCDC115Q96NT0 180 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 TSSK6Q9BXA6 273 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 A0A1W2PP55 124 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 HNRNPCL2B2RXH8 293 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 SLC2A2P11168 524 aaPredicted RBP11.51□□□□□ -0.57
SEC11A-206ENST00000558924 ZNF763Q0D2J5 394 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 TRIM69Q86WT6 500 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 CPXM2Q8N436 756 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 TRAM1L1Q8N609 369 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 MRPL43Q8N983 215 aaKnown RBP11.51□□□□□ -0.57
SEC11A-206ENST00000558924 SLC5A11Q8WWX8 675 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 SNX7Q9UNH6 387 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 PLEKHM1Q9Y4G2 1056 aa11.51□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3DA0A087WVF3 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3IA0A087WXS9 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3EA0A087X179 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3KA0A087X1G2 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3FA6NER0 549 aaPredicted RBP11.5□□□□□ -0.57
SEC11A-206ENST00000558924 HMX3A6NHT5 357 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3LB9A6J9 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 ADH1CP00326 375 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 PRNPP04156 253 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3HP0C7X1 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 ZNF30P17039 623 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 CHMP24386 653 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 CCT3P49368 545 aaKnown RBP11.5□□□□□ -0.57
SEC11A-206ENST00000558924 WSCD2Q2TBF2 565 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3GQ6DHY5 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TBC1D3CQ6IPX1 549 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 ERICH5Q6P6B1 374 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 TRIM40Q6P9F5 258 aa11.5□□□□□ -0.57
SEC11A-206ENST00000558924 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms