RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 MEIOBQ8N635 442 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 PPP1R14CQ8TAE6 165 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 ZNF473Q8WTR7 871 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 TMEM171Q8WVE6 324 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 CMTM7Q96FZ5 175 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 CFAP36Q96G28 342 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
TSPAN3-204ENST00000558394 SONP18583 2426 aaKnown RBP16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 FAM95CA0A1B0GW59 222 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 SIAH2O43255 324 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 GPR75O95800 540 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 TP53P04637 393 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 RPS13P62277 151 aaKnown RBP16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 CHMP1BQ7LBR1 199 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 CNEP1R1Q8N9A8 125 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 GRK7Q8WTQ7 553 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 ESAMQ96AP7 390 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 WDR34Q96EX3 536 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 UCN2Q96RP3 112 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 SLC39A3Q9BRY0 314 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 TMEM79Q9BSE2 394 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 WDR41Q9HAD4 459 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 MXRA5Q9NR99 2828 aa16.2■□□□□ 0.18
TSPAN3-204ENST00000558394 EXPH5Q8NEV8 1989 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 TAPBPO15533 448 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 CCNT2O60583 730 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 PRAMEF4O60810 478 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 NID1P14543 1247 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 CD22P20273 847 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 SERPINB1P30740 379 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 GGT5P36269 586 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 CD79BP40259 229 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 KCNJ5P48544 419 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 SLC12A2P55011 1212 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 ATP5J2P56134 94 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 PPP1R7Q15435 360 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 FBXO48Q5FWF7 155 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 RNASEH2BQ5TBB1 312 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 PRAMEF9Q5VWM5 478 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 KHDRBS2Q5VWX1 349 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 SULT1C3Q6IMI6 304 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 HEPHL1Q6MZM0 1159 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 MED27Q6P2C8 311 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 AAGABQ6PD74 315 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 PLXDC2Q6UX71 529 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 IFNEQ86WN2 208 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 TRIM42Q8IWZ5 723 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 PRR22Q8IZ63 422 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 RGMAQ96B86 450 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 DTNBP1Q96EV8 351 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 ZC3HAV1LQ96H79 300 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 SORBS1Q9BX66 1292 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 ACTR8Q9H981 624 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 LZTFL1Q9NQ48 299 aa16.19■□□□□ 0.18
TSPAN3-204ENST00000558394 A0A1W2PNV4 684 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 PRKRAO75569 313 aaKnown RBP16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 S100BP04271 92 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 POU2F1P14859 743 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 SSTR4P31391 388 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 GALNSP34059 522 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 PCYT1AP49585 367 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 TAS2R39P59534 338 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 DDX39BQ13838 428 aaKnown RBP16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 TBCCQ15814 346 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 SLC30A6Q6NXT4 461 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 ADGRE4PQ86SQ3 457 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 TRIM58Q8NG06 486 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 RDH11Q8TC12 318 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 ANKRD49Q8WVL7 239 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 OR51B5Q9H339 312 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 ELOVL5Q9NYP7 299 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 CD274Q9NZQ7 290 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 CLCF1Q9UBD9 225 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
TSPAN3-204ENST00000558394 RAI1Q7Z5J4 1906 aaPredicted RBP16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 PLOD2O00469 737 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 CBR3O75828 277 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 TNFSF13O75888 250 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 CRHP06850 196 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 SLC35E2BP0CK96 405 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 NR2F6P10588 404 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 ABCD3P28288 659 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 UGT2B10P36537 528 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 MSS51Q4VC12 460 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 CDKL4Q5MAI5 379 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 DEPDC1Q5TB30 811 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 OR2A2Q6IF42 318 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 TRMT10BQ6PF06 316 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 CYP20A1Q6UW02 462 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 ZCCHC7Q8N3Z6 543 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 HS3ST6Q96QI5 342 aa16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 NAP1L3Q99457 506 aaPredicted RBP16.17■□□□□ 0.18
TSPAN3-204ENST00000558394 DERL2Q9GZP9 239 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms