RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MAGIXQ9H6Y5 334 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RNF167Q9H6Y7 350 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NDOR1Q9UHB4 597 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CLDN24A6NM45 220 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TPOP07202 933 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CTNNB1P35222 781 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RAP1AP62834 184 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RPS27AP62979 156 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ALG11Q2TAA5 492 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PDZD3Q86UT5 571 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C1orf52Q8N6N3 182 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CA5BP1Q8WTZ4 195 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SERTAD4Q9NUC0 356 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RBFOX1Q9NWB1 397 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 IL17BQ9UHF5 180 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FKBPLQ9UIM3 349 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RIMS3Q9UJD0 308 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 IER3IP1Q9Y5U9 82 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 EEDO75530 441 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM63AO94886 807 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PDYNP01213 254 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SNRPD1P62314 119 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 DGKZQ13574 1117 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CLEC12BQ2HXU8 276 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MEPCEQ7L2J0 689 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ANKK1Q8NFD2 765 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PINK1Q9BXM7 581 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CREBZFQ9NS37 354 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CLDN4O14493 209 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC10A6Q3KNW5 377 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C2orf76Q3KRA6 126 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RETREG3Q86VR2 466 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM43Q9BTV4 400 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 DCAF16Q9NXF7 216 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 A8MT66 165 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SERPINA4P29622 427 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SDHAP31040 664 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BTG3Q14201 252 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RGNQ15493 299 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NPY5RQ15761 445 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 YIF1BQ5BJH7 314 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PRRT3Q5FWE3 981 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR2G6Q5TZ20 316 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR2T2Q6IF00 324 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 THOC6Q86W42 341 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR56B4Q8NH76 319 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BRIX1Q8TDN6 353 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NARFLQ9H6Q4 476 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RLIMQ9NVW2 624 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 H7BY64 318 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 SLC25A27O95847 323 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF16P17020 682 aaPredicted RBP3.53□□□□□ -1.85
ATXN3-248ENST00000558190 OR4K1Q8NGD4 311 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 PRAP1Q96NZ9 151 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 CDC6Q99741 560 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 BRD9Q9H8M2 597 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 PTTG1IPP53801 180 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 STXBP1P61764 594 aaKnown RBP3.53□□□□□ -1.85
ATXN3-248ENST00000558190 CHAF1BQ13112 559 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 NXNL2Q5VZ03 156 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 SLC46A3Q7Z3Q1 461 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF383Q8NA42 475 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 TXN2Q99757 166 aa3.53□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF850A8MQ14 1090 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZBTB48P10074 688 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 C2CD4AQ8NCU7 369 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TRIB2Q92519 343 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SMARCD2Q92925 531 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZDHHC15Q96MV8 337 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 BTBD17A6NE02 478 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NAP1L6A6NFF2 107 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ONECUT3O60422 494 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OMGP23515 440 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 RBMXP38159 391 aaKnown RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CCR8P51685 355 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SOWAHAQ2M3V2 549 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 C17orf64Q86WR6 236 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 DTWD1Q8N5C7 304 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR6K2Q8NGY2 324 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM125Q96AQ2 219 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 AHCYL2Q96HN2 611 aaKnown RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TNFRSF13CQ96RJ3 184 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ABCG4Q9H172 646 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 UNKLQ9H9P5 680 aaKnown RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF629Q9UEG4 869 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ADRA2BP18089 450 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HSPB3Q12988 150 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CLINT1Q14677 625 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MAVSQ7Z434 540 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 GLCCI1Q86VQ1 547 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF679Q8IYX0 411 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF101Q8IZC7 436 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SCAMP5Q8TAC9 235 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CSGALNACT1Q8TDX6 532 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SPRYD4Q8WW59 207 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 YIPF6Q96EC8 236 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 STRA6Q9BX79 667 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 PDGFDQ9GZP0 370 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms