RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PRAMEF2O60811 474 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 GPX2P18283 190 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 MAOAP21397 527 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 MMP11P24347 488 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 CPOXP36551 454 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 PGM1P36871 562 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 STAT5AP42229 794 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 NCALDP61601 193 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 DCAF7P61962 342 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 BTG2P78543 158 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 SLC25A3Q00325 362 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 RBBP4Q09028 425 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 DNASE1L3Q13609 305 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 PRICKLE4Q2TBC4 344 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ZNF628Q5EBL2 1059 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 C8orf82Q6P1X6 216 aaPredicted RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 TMEM205Q6UW68 189 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ANGPTL8Q6UXH0 198 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ASRGL1Q7L266 308 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 OR2L13Q8N349 312 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 NUP43Q8NFH3 380 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 OR52N2Q8NGI0 321 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 OR9A2Q8NGT5 310 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ZFP90Q8TF47 636 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 CTHRC1Q96CG8 243 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 FBXL20Q96IG2 436 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 INPP5KQ9BT40 448 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 SOX17Q9H6I2 414 aaPredicted RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 IL1RL2Q9HB29 575 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 NECTIN3Q9NQS3 549 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 PNO1Q9NRX1 252 aaKnown RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 TMEM181Q9P2C4 612 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 ABCD2Q9UBJ2 740 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 TCFL5Q9UL49 500 aa11.6□□□□□ -0.55
TPM1-209ENST00000558072 C19orf53Q9UNZ5 99 aaPredicted RBP11.6□□□□□ -0.55
TPM1-209ENST00000558072 LOC102723996A0A087X1L8 192 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 TRBV5-3A0A0A0MS03 114 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 WASHC1A8K0Z3 465 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 C17orf105B2RV13 164 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 GSC2O15499 205 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 JRKO75564 520 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 CIB2O75838 187 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 AK1P00568 194 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 SLC6A2P23975 617 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 PTPN6P29350 595 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 DLSTP36957 453 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 KHKP50053 298 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 FUT7Q11130 342 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 BNIP2Q12982 314 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 EXT1Q16394 746 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 ATAD3BQ5T9A4 648 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 SAXO2Q658L1 398 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 FAM199XQ6PEV8 388 aaPredicted RBP11.59□□□□□ -0.55
TPM1-209ENST00000558072 TMEM107Q6UX40 140 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 TIPARPQ7Z3E1 657 aaKnown RBP11.59□□□□□ -0.55
TPM1-209ENST00000558072 SZRD1Q7Z422 152 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 C6orf120Q7Z4R8 191 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 AMER2Q8N7J2 671 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 ENDOVQ8N8Q3 282 aaKnown RBP11.59□□□□□ -0.55
TPM1-209ENST00000558072 CDRT4Q8N9R6 151 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 MIPOL1Q8TD10 442 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 CT55Q8WUE5 264 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 UCN3Q969E3 161 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 FAM120BQ96EK7 910 aaKnown RBP11.59□□□□□ -0.55
TPM1-209ENST00000558072 SLC35G5Q96KT7 338 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 CDRT15Q96T59 188 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 THTPAQ9BU02 230 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 ACTRT3Q9BYD9 372 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 CXorf36Q9H7Y0 433 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 SLAMF7Q9NQ25 335 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 ASCL3Q9NQ33 180 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 EXD2Q9NVH0 621 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 MAT2BQ9NZL9 334 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 CALML5Q9NZT1 146 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 LIPT1Q9Y234 373 aa11.59□□□□□ -0.55
TPM1-209ENST00000558072 MYOCOSA0A1B0GUC4 107 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 A0A1W2PQ72 361 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 OR2W5A6NFC9 320 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 FXYD1O00168 92 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 PEX12O00623 359 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 CNOT3O75175 753 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 KLF7O75840 302 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 GSNP06396 782 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 HSD17B1P14061 328 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 HOXB6P17509 224 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 MATN1P21941 496 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ME2P23368 584 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 MC3RP41968 323 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 CDKN2CP42773 168 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 CRATP43155 626 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 CDK9P50750 372 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 SLC7A2P52569 658 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms