RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HSD17B1P14061 328 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 PTGER1P34995 402 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 CEACAM7Q14002 265 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 RGNQ15493 299 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 ELAVL1Q15717 326 aaKnown RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 CYP51A1Q16850 503 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 PGM2L1Q6PCE3 622 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 FAM199XQ6PEV8 388 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 IGF2-ASQ6U949 168 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 C6orf120Q7Z4R8 191 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 SERPINA11Q86U17 422 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 LAPTM4BQ86VI4 370 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 NLGN4XQ8N0W4 816 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 CLEC4FQ8N1N0 589 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 OR2L13Q8N349 312 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 NUP43Q8NFH3 380 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 NLGN4YQ8NFZ3 816 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 OR7G2Q8NG99 324 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 OR10A6Q8NH74 314 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 PNPT1Q8TCS8 783 aaKnown RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 SLC35G5Q96KT7 338 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 ART5Q96L15 291 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 SLC46A1Q96NT5 459 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 MS4A4EQ96PG1 132 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 KCTD14Q9BQ13 255 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 FAM117AQ9C073 453 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 IKZF5Q9H5V7 419 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 EPS8L2Q9H6S3 715 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 AKIRIN1Q9H9L7 192 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 PNO1Q9NRX1 252 aaKnown RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 SUCOQ9UBS9 1254 aaKnown RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 C19orf25Q9UFG5 118 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 CD300AQ9UGN4 299 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 GVINP1Q7Z2Y8 2422 aa15.77■□□□□ 0.11
SNX1-203ENST00000558040 DCDC2BA2VCK2 349 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 PRORSD1PA6NEY8 169 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 FAM220BPB1ANY3 271 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 UPK1AO00322 258 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 BRINP1O60477 761 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 STAMBPO95630 424 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 CRATP43155 626 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 GSK3BP49841 420 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 KHKP50053 298 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 PRKAG1P54619 331 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 MRPS35P82673 323 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 BNIP2Q12982 314 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNX1-203ENST00000558040 FAM111BQ6SJ93 734 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 TIPARPQ7Z3E1 657 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 GPR155Q7Z3F1 870 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 RNF130Q86XS8 419 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 HPS6Q86YV9 775 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 TMEM151BQ8IW70 566 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 RNF148Q8N7C7 305 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 OR2T12Q8NG77 320 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 OR14A16Q8NHC5 309 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 DAZLQ92904 295 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 UTP4Q969X6 686 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 CTHRC1Q96CG8 243 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 NRSN2Q9GZP1 204 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 MUC13Q9H3R2 512 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 THUMPD1Q9NXG2 353 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 PACSIN3Q9UKS6 424 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 FAF1Q9UNN5 650 aaPredicted RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 C19orf53Q9UNZ5 99 aaPredicted RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 PTRH2Q9Y3E5 179 aaKnown RBP15.76■□□□□ 0.11
SNX1-203ENST00000558040 CLCA3PQ9Y6N3 262 aa15.76■□□□□ 0.11
SNX1-203ENST00000558040 SCN2AQ99250 2005 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 CDRT15L2A8MXV6 281 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 C17orf105B2RV13 164 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 C21orf140B9A014 251 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 RAD1O60671 282 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 CNOT3O75175 753 aaKnown RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 IGHEP01854 428 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 TCN1P20061 433 aaPredicted RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 TCN2P20062 427 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 FOLR3P41439 243 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 PRIM2P49643 509 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 PGDP52209 483 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 OR4D2P58180 307 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 RPS15P62841 145 aaKnown RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 MGAT2Q10469 447 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 ZNF267Q14586 743 aaPredicted RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 TRMT12Q53H54 448 aaKnown RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 FHL5Q5TD97 284 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 ERICH5Q6P6B1 374 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 IFNEQ86WN2 208 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 MARCH9Q86YJ5 346 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 ENDOVQ8N8Q3 282 aaKnown RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 OR2Y1Q8NGV0 311 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 CT55Q8WUE5 264 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 REXO5Q96IC2 774 aaKnown RBP15.75■□□□□ 0.11
SNX1-203ENST00000558040 CNPPD1Q9BV87 410 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 SLC7A8Q9UHI5 535 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 ZNF639Q9UID6 485 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 SEC16AO15027 2179 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 PTPRBP23467 1997 aa15.75■□□□□ 0.11
SNX1-203ENST00000558040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.74■□□□□ 0.11
SNX1-203ENST00000558040 PRAMEF2O60811 474 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms