RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 WASH3PC4AMC7 463 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 PDPK1O15530 556 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC28A2O43868 658 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ORC5O43913 435 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SOD2P04179 222 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 MMP11P24347 488 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 INPP1P49441 399 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CAV3P56539 151 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CLDN20P56880 219 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC7A9P82251 487 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CDK5Q00535 292 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 FABP5Q01469 135 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 IL18Q14116 193 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 LYPD8Q6UX82 237 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC9B2Q86UD5 537 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 LMNTD1Q8N9Z9 388 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 OR4K5Q8NGD3 323 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 OR2A12Q8NGT7 310 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SUN5Q8TC36 379 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 STMN3Q9NZ72 180 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 NLKQ9UBE8 527 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 FBXW2Q9UKT8 454 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TRDV1A0A1B0GX56 115 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 HMGN4O00479 90 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 PRODHO43272 600 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TPD52L2O43399 206 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 HPGDSO60760 199 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC43A1O75387 559 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 OR2B3O76000 313 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 EPHX1P07099 455 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 GAS1P54826 345 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 RAB25P57735 213 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TAP2Q03519 686 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 RAB33AQ14088 237 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SF3A2Q15428 464 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 CEP78Q5JTW2 689 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SIGIRRQ6IA17 410 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC36A4Q6YBV0 504 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 CREB3L2Q70SY1 520 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 GLCCI1Q86VQ1 547 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 IQCHQ86VS3 1027 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TCEAL8Q8IYN2 117 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SLC43A3Q8NBI5 491 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM145Q8NBT3 493 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 ZNF740Q8NDX6 193 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 WFDC6Q9BQY6 131 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM43Q9BTV4 400 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SLAMF7Q9NQ25 335 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SPG21Q9NZD8 308 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 TRAV19A0A0A6YYK7 116 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A0X1KG70 313 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 APOL3O95236 402 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 GSTM3P21266 225 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 XPAP23025 273 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 OR3A3P47888 321 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MAPK12P53778 367 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 RRAS2P62070 204 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 EFNB1P98172 346 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 HSPB3Q12988 150 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MAB21L1Q13394 359 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 FAM214AQ32MH5 1076 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MZT2AQ6P582 158 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 CD200R1LQ6Q8B3 271 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 FAM109AQ8N4B1 249 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 SMPDL3AQ92484 453 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 FGF11Q92914 225 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 PHF11Q9UIL8 331 aa11.18□□□□□ -0.62
VIPAS39-211ENST00000557658 LRRTM2O43300 516 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 TBX19O60806 448 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 RB1P06400 928 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 FAM157BP0CG42 384 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 TIMP2P16035 220 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 MTNR1AP48039 350 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 EVX1P49640 407 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 RIN1Q13671 783 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 P2RY14Q15391 338 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 MINDY4Q4G0A6 757 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 ENTPD8Q5MY95 495 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 C1orf94Q6P1W5 598 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 RFPL4BQ6ZWI9 263 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 TECPR1Q7Z6L1 1165 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 TBC1D19Q8N5T2 526 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 AP2M1Q96CW1 435 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 COQ7Q99807 217 aa11.17□□□□□ -0.62
VIPAS39-211ENST00000557658 ATF6BQ99941 703 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms