RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KLRC4-KLRK1H3BQV0 150 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 J3QL48 77 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 PIP5K1BO14986 540 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 LSM1O15116 133 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 SIAH2O43255 324 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 NME2P1O60361 137 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 CT62P0C5K7 136 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 EDN3P14138 238 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 NME2P22392 152 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 MAPK1P28482 360 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ARRB2P32121 409 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 MPIP34949 423 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 SLC1A6P48664 564 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 MAGOHP61326 146 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 RPL38P63173 70 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 STX3Q13277 289 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 MPP2Q14168 576 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 AGBL2Q5U5Z8 902 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 HLA-DQA1Q5Y7H0 255 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 FAM71E1Q6IPT2 247 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 GALNTL5Q7Z4T8 443 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 VWA5B2Q8N398 1253 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ST6GALNAC3Q8NDV1 305 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 OR2T11Q8NH01 316 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF675Q8TD23 568 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 DOK4Q8TEW6 326 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 TP53INP1Q96A56 240 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 EXOSC8Q96B26 276 aaKnown RBP11.57□□□□□ -0.56
SLIRP-211ENST00000557623 TLCD1Q96CP7 247 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 FCRL1Q96LA6 429 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 TAAR6Q96RI8 345 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 GAL3ST4Q96RP7 486 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 WWTR1Q9GZV5 400 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 OR10A5Q9H207 317 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 NKIRAS1Q9NYS0 192 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 MAT2BQ9NZL9 334 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 RAP2CQ9Y3L5 183 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 C2orf92A0A1B0GVN3 265 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ASPDHA6ND91 283 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 BCAS2O75934 225 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-211ENST00000557623 CBX6O95503 412 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 DDX5P17844 614 aaKnown RBP11.56□□□□□ -0.56
SLIRP-211ENST00000557623 BGNP21810 368 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 GNLYP22749 145 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 SSTR4P31391 388 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 SOX3P41225 446 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ASMTP46597 345 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 CEBPEQ15744 281 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 GALNTL6Q49A17 601 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ATP6AP1LQ52LC2 224 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 RFTN2Q52LD8 501 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-211ENST00000557623 XKR7Q5GH72 579 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF324BQ6AW86 544 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-211ENST00000557623 IL20RBQ6UXL0 311 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 C16orf47Q6ZP98 133 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-211ENST00000557623 RTL4Q6ZR62 310 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 HDXQ7Z353 690 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF227Q86WZ6 799 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 TICAM1Q8IUC6 712 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 TAGAPQ8N103 731 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 GOLM1Q8NBJ4 401 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 POGLUT1Q8NBL1 392 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 NR4A3Q92570 626 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ERP27Q96DN0 273 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 SGCZQ96LD1 299 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 BBS4Q96RK4 519 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 SLX1AQ9BQ83 275 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 HES7Q9BYE0 225 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 TAS2R7Q9NYW3 318 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 PRODH2Q9UF12 536 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 ESPL1Q14674 2120 aa11.56□□□□□ -0.56
SLIRP-211ENST00000557623 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 ITM2AO43736 263 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 SKAP2O75563 359 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 LYPLA1O75608 230 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 SLITRK5O94991 958 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 OR6B1O95007 311 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 CLPSP04118 112 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 S1PR1P21453 382 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 NTSP30990 170 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 NRG3P56975 720 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 DUSP2Q05923 314 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 MGAT2Q10469 447 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 MAD2L1Q13257 205 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-211ENST00000557623 FAM180BQ6P0A1 224 aa11.55□□□□□ -0.56
SLIRP-211ENST00000557623 FAM111BQ6SJ93 734 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms