RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GLI4P10075 376 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 CPMP14384 443 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 NT5EP21589 574 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 GDF1P27539 372 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 ZFP36L2P47974 494 aaKnown RBP13.02□□□□□ -0.33
SNX6-210ENST00000557341 NRG3P56975 720 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 KRTAP10-9P60411 292 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 FUT7Q11130 342 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 RTL6Q6ICC9 239 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 COMMD6Q7Z4G1 85 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 CDH24Q86UP0 819 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 METTL4Q8N3J2 472 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 LIX1Q8N485 282 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 ZNF483Q8TF39 744 aaPredicted RBP13.02□□□□□ -0.33
SNX6-210ENST00000557341 OR10A5Q9H207 317 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 BRF2Q9HAW0 419 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 SNX6Q9UNH7 406 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 ANKHD1Q8IWZ3 2542 aaKnown RBP13.02□□□□□ -0.33
SNX6-210ENST00000557341 HIVEP1P15822 2718 aa13.02□□□□□ -0.33
SNX6-210ENST00000557341 MED13LQ71F56 2210 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 A0A0G2JNJ9 132 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 C1orf226A1L170 272 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 ANKRD33BA6NCL7 494 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 HOXD4P09016 255 aaPredicted RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 CT62P0C5K7 136 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 PORP16435 677 aaPredicted RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 XKP51811 444 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 FBXW4P57775 412 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 RPP38P78345 283 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 SGO1Q5FBB7 561 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 TMEM198Q66K66 360 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 SLC48A1Q6P1K1 146 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 LETMD1Q6P1Q0 360 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 RPS27LQ71UM5 84 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 DMRTC2Q8IXT2 367 aaPredicted RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 CLYBLQ8N0X4 340 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 ZNF615Q8N8J6 731 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 OR7G1Q8NGA0 311 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 UHMK1Q8TAS1 419 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 NEIL3Q8TAT5 605 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 TRPC4APQ8TEL6 797 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 SELENOMQ8WWX9 145 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 C1QTNF3Q9BXJ4 246 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 SLC24A3Q9HC58 644 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 FARSBQ9NSD9 589 aaKnown RBP13.01□□□□□ -0.33
SNX6-210ENST00000557341 Q9UFV3 132 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 TRPS1Q9UHF7 1281 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 ITGB1BP2Q9UKP3 347 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 PCDHGB3Q9Y5G1 929 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 PCDHA9Q9Y5H5 950 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 NPFFR2Q9Y5X5 522 aa13.01□□□□□ -0.33
SNX6-210ENST00000557341 A0A1B0GTL3 188 aa13□□□□□ -0.33
SNX6-210ENST00000557341 TRIM3O75382 744 aaPredicted RBP13□□□□□ -0.33
SNX6-210ENST00000557341 SNX4O95219 450 aa13□□□□□ -0.33
SNX6-210ENST00000557341 PDYNP01213 254 aa13□□□□□ -0.33
SNX6-210ENST00000557341 ATP1B1P05026 303 aa13□□□□□ -0.33
SNX6-210ENST00000557341 KRT15P19012 456 aa13□□□□□ -0.33
SNX6-210ENST00000557341 GPX3P22352 226 aa13□□□□□ -0.33
SNX6-210ENST00000557341 DEKP35659 375 aaKnown RBP13□□□□□ -0.33
SNX6-210ENST00000557341 MASP1P48740 699 aa13□□□□□ -0.33
SNX6-210ENST00000557341 CDH13P55290 713 aa13□□□□□ -0.33
SNX6-210ENST00000557341 GALNT1Q10472 559 aaPredicted RBP13□□□□□ -0.33
SNX6-210ENST00000557341 LGSNQ5TDP6 509 aa13□□□□□ -0.33
SNX6-210ENST00000557341 TMEM64Q6YI46 380 aa13□□□□□ -0.33
SNX6-210ENST00000557341 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
SNX6-210ENST00000557341 ADIPOR1Q96A54 375 aa13□□□□□ -0.33
SNX6-210ENST00000557341 RILPQ96NA2 401 aa13□□□□□ -0.33
SNX6-210ENST00000557341 ZNF559Q9BR84 538 aa13□□□□□ -0.33
SNX6-210ENST00000557341 BRINP2Q9C0B6 783 aa13□□□□□ -0.33
SNX6-210ENST00000557341 NMRK1Q9NWW6 199 aa13□□□□□ -0.33
SNX6-210ENST00000557341 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
SNX6-210ENST00000557341 KCNN3Q9UGI6 736 aa13□□□□□ -0.33
SNX6-210ENST00000557341 CFL2Q9Y281 166 aa13□□□□□ -0.33
SNX6-210ENST00000557341 C15orf38-AP3S2A0A0A6YYH1 394 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
SNX6-210ENST00000557341 ABHD2P08910 425 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 SBK3P0C264 359 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 TSPAN8P19075 237 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 POU3F2P20265 443 aaPredicted RBP12.99□□□□□ -0.33
SNX6-210ENST00000557341 TAC1P20366 129 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 ABCD3P28288 659 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 ADH7P40394 386 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 TRPC1P48995 793 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 CLCQ05315 142 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 NNATQ16517 81 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 PRICKLE4Q2TBC4 344 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 SLC25A35Q3KQZ1 300 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
SNX6-210ENST00000557341 RIPPLY2Q5TAB7 128 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms