RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PCDH1Q08174 1060 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 TGM3Q08188 693 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 DMTNQ08495 405 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 SLAMF1Q13291 335 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 ZNF460Q14592 562 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 TOMM20Q15388 145 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 EEF1A1P5Q5VTE0 462 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 ZNF550Q7Z398 422 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 ZNF615Q8N8J6 731 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 SRFBP1Q8NEF9 429 aaKnown RBP11.37□□□□□ -0.59
PSEN1-221ENST00000557293 OR1J4Q8NGS1 313 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 PTCD3Q96EY7 689 aaKnown RBP11.37□□□□□ -0.59
PSEN1-221ENST00000557293 OR2B2Q9GZK3 357 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 SNX15Q9NRS6 342 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 DNAJC11Q9NVH1 559 aa11.37□□□□□ -0.59
PSEN1-221ENST00000557293 SAP18O00422 153 aaKnown RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 PLOD2O00469 737 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CLGNO14967 610 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 PHF1O43189 567 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 ICOSLGO75144 302 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 IFNA2P01563 188 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CT62P0C5K7 136 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 S1PR1P21453 382 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CHMP24386 653 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 GALNSP34059 522 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CPOXP36551 454 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 KIR2DL2P43627 348 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CLDN18P56856 261 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 AP5B1Q2VPB7 878 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 TMEM35AQ53FP2 167 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 SPANXN3Q5MJ09 141 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 C10orf62Q5T681 223 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 DEPDC1Q5TB30 811 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 MRM1Q6IN84 353 aaKnown RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 TMEM81Q6P7N7 255 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 TRMT10BQ6PF06 316 aaKnown RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 ANGPTL8Q6UXH0 198 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 PRR22Q8IZ63 422 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 RNF175Q8N4F7 328 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 NKAPQ8N5F7 415 aaKnown RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 WDSUB1Q8N9V3 476 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 RIT1Q92963 219 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 HGDQ93099 445 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CERS2Q96G23 380 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 VPS39Q96JC1 886 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 NODALQ96S42 347 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 MED18Q9BUE0 208 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 REG4Q9BYZ8 158 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 PHACTR1Q9C0D0 580 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 OPN3Q9H1Y3 402 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 OR51B5Q9H339 312 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 ACBD3Q9H3P7 528 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 SERHLQ9NQF3 203 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 HEY2Q9UBP5 337 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CTNNAL1Q9UBT7 734 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 CORO1CQ9ULV4 474 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-221ENST00000557293 SPACA6W5XKT8 324 aa11.36□□□□□ -0.59
PSEN1-221ENST00000557293 A0A1W2PR48 441 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 FRG2CA6NGY1 282 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 NCF1BA6NI72 391 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 NCF1CA8MVU1 366 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CAPN14A8MX76 684 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 H0Y3Z8 333 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 DYRK3O43781 588 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CD5LO43866 347 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 WISP3O95389 354 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 TTC4O95801 387 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 AIFM1O95831 613 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CRHP06850 196 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 NCF1P14598 390 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CXCR5P32302 372 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ATP5J2P56134 94 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CLDN15P56746 228 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 TAS2R39P59534 338 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 TGFBIQ15582 683 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 KRTAP24-1Q3LI83 254 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 RNASEH2BQ5TBB1 312 aaKnown RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ANKRD34AQ69YU3 496 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ENPP6Q6UWR7 440 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 SH2D5Q6ZV89 423 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 GPR180Q86V85 440 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 LAS2Q8IYD9 372 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 TXLNBQ8N3L3 684 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 PGM2Q96G03 612 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ZC3HAV1LQ96H79 300 aaKnown RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 FAM111AQ96PZ2 611 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 EFCAB11Q9BUY7 163 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 CXorf21Q9HAI6 301 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 RNF112Q9ULX5 631 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 EXO1Q9UQ84 846 aaKnown RBP11.35□□□□□ -0.59
PSEN1-221ENST00000557293 ASB4Q9Y574 426 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 PSAT1Q9Y617 370 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 EXPH5Q8NEV8 1989 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 PRR14LQ5THK1 2151 aa11.35□□□□□ -0.59
PSEN1-221ENST00000557293 GLOD5A6NK44 160 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms