RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ETFAP13804 333 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 POU2F1P14859 743 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 PPM1AP35813 382 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 SPAM1P38567 509 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 GAS1P54826 345 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 RAG2P55895 527 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ERVK-21P61565 698 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 CTAG1AP78358 180 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 POU6F2P78424 691 aaPredicted RBP11.91□□□□□ -0.5
APEX1-216ENST00000557159 PDE7AQ13946 482 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 TMEM65Q6PI78 240 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 HUS1BQ8NHY5 278 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.91□□□□□ -0.51e-27■■□□□ 13.1
APEX1-216ENST00000557159 BCL7CQ8WUZ0 217 aaPredicted RBP11.91□□□□□ -0.5
APEX1-216ENST00000557159 TM9SF4Q92544 642 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 UFD1Q92890 307 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 TMEM169Q96HH4 297 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ZSWIM3Q96MP5 696 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 FUZQ9BT04 418 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 PPA2Q9H2U2 334 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 GALNT9Q9HCQ5 603 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ZNF275Q9NSD4 429 aaPredicted RBP11.91□□□□□ -0.5
APEX1-216ENST00000557159 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 GULP1Q9UBP9 304 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 ACAD8Q9UKU7 415 aa11.91□□□□□ -0.5
APEX1-216ENST00000557159 EXOSC1Q9Y3B2 195 aaKnown RBP11.91□□□□□ -0.5
APEX1-216ENST00000557159 TRAV19A0A0A6YYK7 116 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ADAM12O43184 909 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PLOD3O60568 738 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 DHFRP00374 187 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 RB1P06400 928 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ANXA3P12429 323 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CORO1AP31146 461 aaKnown RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 TIA1P31483 386 aaKnown RBP eCLIP11.9□□□□□ -0.57e-13■■■□□ 18.3
APEX1-216ENST00000557159 BDKRB1P46663 353 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 EPHB3P54753 998 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PFN3P60673 137 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 IRF8Q02556 426 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 HSF2Q03933 536 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 TWF1Q12792 350 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 RAB33AQ14088 237 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 AANATQ16613 207 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 COX20Q5RI15 118 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PLEKHS1Q5SXH7 462 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CEACAM20Q6UY09 585 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PRSS42Q7Z5A4 293 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 MTERF3Q96E29 417 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 OR2M2Q96R28 347 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 LYSMD1Q96S90 227 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SLC35A5Q9BS91 424 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 KLF16Q9BXK1 252 aaPredicted RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 MED28Q9H204 178 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 GHITMQ9H3K2 345 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 REEP4Q9H6H4 257 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 C11orf16Q9NQ32 467 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SLC22A14Q9Y267 594 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SPIN1Q9Y657 262 aaPredicted RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 MGAT4DA6NG13 374 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 I3L521 148 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CBX4O00257 560 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 FFAR1O14842 300 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 KPNA5O15131 536 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SH3BP5O60239 455 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 TSPAN3O60637 253 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 GPR37L1O60883 481 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SOCS5O75159 536 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 FGF18O76093 207 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 STOMP27105 288 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 SSTR4P31391 388 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CTNNB1P35222 781 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 MAPK8P45983 427 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CSNK1DP48730 415 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 INPP1P49441 399 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 DGKGP49619 791 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 HBA1P69905 142 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PLD1Q13393 1074 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 IL18Q14116 193 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 P2RY14Q15391 338 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 CRTC2Q53ET0 693 aaPredicted RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 ATAT1Q5SQI0 421 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 DCST1Q5T197 706 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 IKBIPQ70UQ0 350 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 TCEAL8Q8IYN2 117 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ARIH2OSQ8N7S6 290 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ZNF485Q8NCK3 441 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 ARHGAP9Q9BRR9 750 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 PPIL3Q9H2H8 161 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms