RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SLC22A18Q96BI1 424 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 FAM120BQ96EK7 910 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 CENPNQ96H22 339 aaPredicted RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 C12orf66Q96MD2 445 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 NSMCE2Q96MF7 247 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ZNF570Q96NI8 536 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 OR2M4Q96R27 311 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PANX1Q96RD7 426 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PKP2Q99959 881 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CHID1Q9BWS9 393 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PAIP1Q9H074 479 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 OSGEPL1Q9H4B0 414 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 REEP4Q9H6H4 257 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 KAT8Q9H7Z6 458 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 SERHLQ9NQF3 203 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 DMRT3Q9NQL9 472 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 IMP3Q9NV31 184 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 TMEM184CQ9NVA4 438 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 TRNAU1APQ9NX07 287 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 OR6C2Q9NZP2 312 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 CIDEBQ9UHD4 219 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ATP6V1HQ9UI12 483 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RIMS3Q9UJD0 308 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 ANAPC2Q9UJX6 822 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 RAB26Q9ULW5 256 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 MMP17Q9ULZ9 603 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 SUFUQ9UMX1 484 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 AURKCQ9UQB9 309 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 DMTF1Q9Y222 760 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 PCDHGA2Q9Y5H1 932 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 NOX1Q9Y5S8 564 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 GMEB1Q9Y692 573 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 NYNRINQ9P2P1 1898 aaKnown RBP4.23□□□□□ -1.73
SRP54-212ENST00000556992 PKD1L2Q7Z442 2459 aa4.23□□□□□ -1.73
SRP54-212ENST00000556992 NUP205Q92621 2012 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TRBV5-3A0A0A0MS03 114 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RNF103-CHMP3A0A140T963 221 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TRBC2A0A5B9 178 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 KRT87PA6NCN2 255 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 POM121BA6NF01 834 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR5K4A6NMS3 321 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CLIC1O00299 241 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CXCR6O00574 342 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SCAMP2O15127 329 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 CLOCKO15516 846 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MBTPS2O43462 519 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LATO43561 262 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR1F1O43749 312 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PCDH7O60245 1069 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TBX19O60806 448 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SCN2BO60939 215 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PRSS23O95084 383 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LRATO95237 230 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CPSF4O95639 269 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 SEMA4FO95754 770 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TNFP01375 233 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 IFNA14P01570 189 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 KLK1P06870 262 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RETP07949 1114 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RAP2AP10114 183 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LAMP1P11279 417 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MTHFD1P11586 935 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 CDH1P12830 882 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ZNF26P17031 533 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 ENGP17813 658 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 GPX2P18283 190 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 GABRG2P18507 467 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ATP6V1B2P21281 511 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PEX2P28328 305 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CMPK1P30085 196 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ACSL1P33121 698 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SHMT2P34897 504 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RABIFP47224 123 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 POLE2P56282 527 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR4D2P58180 307 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CLRN1P58418 232 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MTPNP58546 118 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SRP54P61011 504 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 TRA2BP62995 288 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 PHC1P78364 1004 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RAE1P78406 368 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 HSD11B2P80365 405 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 NHLH1Q02575 133 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TGM3Q08188 693 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ZNF763Q0D2J5 394 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 C2orf80Q0P641 193 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ILF3Q12906 894 aaKnown RBP eCLIP4.22□□□□□ -1.73
SRP54-212ENST00000556992 BLMHQ13867 455 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 VEZF1Q14119 521 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CLCA4Q14CN2 919 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 HEPACAMQ14CZ8 416 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ATP6AP1Q15904 470 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 UGT8Q16880 541 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 INTS11Q5TA45 600 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 KIAA0895LQ68EN5 471 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR4F3Q6IEY1 312 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 Q6ZSR6 202 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms